Mercurial > repos > mingchen0919 > aurora_fastqc_site

diff expose-outputs-to-galaxy-history.sh @ 8:94762f1cb779 draft

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planemo upload commit 76f9ca75d5b1c0c0fad6c10876d9dfeba7d5ecff-dirty
author mingchen0919
date Mon, 30 Apr 2018 16:15:39 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/expose-outputs-to-galaxy-history.sh	Mon Apr 30 16:15:39 2018 -0400
@@ -0,0 +1,11 @@
+# change directory to tool outputs directory
+cd ${REPORT_FILES_PATH}
+
+# copy outputs from tool outputs directory to corresponding galaxy output path
+if [ -e rmarkdown_report.html ]; then
+  cp rmarkdown_report.html ${REPORT}
+fi
+
+if [ -e index.html ]; then
+  cp index.html ${REPORT}
+fi