Mercurial > repos > mingchen0919 > aurora_fasta_importer

view build-and-run-job-scripts.sh @ 0:461163067ced draft

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planemo upload
author mingchen0919
date Tue, 15 May 2018 00:50:47 -0400
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children 3d4f21a85f68
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# run job scripts within the tool outputs directory
cd ${REPORT_FILES_PATH}

#========== build and run job 1 script ============
cat >curl-download.sh <<EOF
if [ "$X_f" != 'None' ];then
  cp $X_f $X_O
elif [ "$X_u" != "TRUE" ];then
  curl $X_u > $X_O
fi
EOF

# run job 1 script
sh curl-download.sh