Mercurial > repos > mingchen0919 > aurora_dustmasker

annotate galaxy_outputs.sh @ 1:e0828838e0f3 draft default tip

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update
author mingchen0919
date Fri, 09 Nov 2018 15:25:01 -0500
parents b8c76b06d724
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1 # change directory to tool outputs directory
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2 cd ${REPORT_FILES_PATH}
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3
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4 # copy outputs from tool outputs directory to corresponding galaxy output path
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5 if [ -e "rmarkdown_report.html" ]; then
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6 cp rmarkdown_report.html ${REPORT}
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7 fi
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8
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9 if [ -e "index.html" ]; then
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10 cp index.html ${REPORT}
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11 fi
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12
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13 if [ -e "masked_file.txt" ]; then
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14 cp masked_file.txt $X_H
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15 fi