comparison build-and-run-job-scripts.sh @ 2:350afb9412fc draft default tip

planemo upload
author mingchen0919
date Mon, 14 May 2018 16:58:24 -0400
parents 7a3bb304fe1d
children
comparison
equal deleted inserted replaced
1:e4392f52dc33 2:350afb9412fc
1 # run job scripts within the tool outputs directory 1 # run job scripts within the tool outputs directory
2 cd ${REPORT_FILES_PATH} 2 cd ${REPORT_FILES_PATH}
3 3
4 #========== build and run job 1 script ============ 4 #========== build and run job 1 script ============
5 cat >curl-download.sh <<EOF 5 cat >curl-download.sh <<EOF
6 curl -O output.$X_n $X_u > curl-log.txt 2>&1 6 curl $X_u > output.$X_n
7 cp output.$X_n ${JOB_WORKING_DIR}
7 EOF 8 EOF
8 9
9 # run job 1 script 10 # run job 1 script
10 sh curl-download.sh 11 sh curl-download.sh
11 12