# HG changeset patch
# User mingchen0919
# Date 1528776702 14400
# Node ID f547458859312fa549af0d495212418ccac688c7
# Parent  41c25558889a9306dccab0cc7c34fd7a59f46a2e
planemo upload for repository https://github.com/feltus/BDSS

diff -r 41c25558889a -r f54745885931 build-and-run-job-scripts.sh
--- a/build-and-run-job-scripts.sh	Mon Jun 11 23:56:49 2018 -0400
+++ b/build-and-run-job-scripts.sh	Tue Jun 12 00:11:42 2018 -0400
@@ -3,11 +3,10 @@
 mkdir download_dir
 
 #========== build and run bdss-download.sh script ============
-echo 'for u in $(echo $X_u | sed "s/,/ /g");' > bdss-download.sh
+echo 'export PATH=/main/sites/galaxy/galaxy/tools/_conda/bin:$PATH' > bdss-download.sh
+echo 'for u in $(echo $X_u | sed "s/,/ /g");' >> bdss-download.sh
 echo 'do' >> bdss-download.sh
 echo '  bdss transfer --destination download_dir -u $u' >> bdss-download.sh
 echo 'done' >> bdss-download.sh
 
-
-echo 'export PATH=/main/sites/galaxy/galaxy/tools/_conda/bin:$PATH'
 sh bdss-download.sh