Mercurial > repos > melissacline > xena_import

view xena_import.xml @ 14:55c1451f92b2

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Determined that the tool installation works if the toolshed and changeset repository are both provided for the complex dependency. Testing with just the toolshed now.
author melissacline
date Mon, 15 Sep 2014 12:00:11 -0700
parents cb0bb2406736
children 7f03b062f330
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<tool id="xenaImport" description="Import into XENA from Galaxy" name="XENA Import" version="0.0.1">
  <description>Import from Galaxy into the Xena VM</description>
  <requirements>
    <requirement type="package" version="1.0">installXena</requirement>
  </requirements>
  <command interpreter="python">
    xena_import.py ${xenaInputData} ${cohort} ${metadataType} 
  </command>
  <inputs>
    <param format="data" type="data" name="xenaInputData" label="Data to import to Xena" optional="false"/>
    <param format="str" type="text" name="cohort" label="Cohort" optional="false"/>
    <param format="str" type="text" name="metadataType" label="Data Type (e.g. clinicalMatrix)" optional="false"/>
  </inputs>
  <help>
    To Appear
  </help>
</tool>