Mercurial > repos > melissacline > xena_import

diff xena_import.xml @ 2:b3cd322f7749

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author melissacline
date Wed, 03 Sep 2014 15:34:45 -0400
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children cae2b765ca5d
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/xena_import.xml	Wed Sep 03 15:34:45 2014 -0400
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+<tool id="xenaImport" description="XENA Import" name="XENA Import" version="0.0.1">
+  <description>Import into the Xena VM</description>
+  <requirements>
+    <requirement type="package" version="1.0">installXena2</requirement>
+  </requirements>
+  <command interpreter="python">
+    xena_import.py ${xenaInputData} ${cohort} ${metadataType} ${XENA_BASE_DIR}/files/
+  </command>
+  <inputs>
+    <param format="data" type="data" name="xenaInputData" label="Data to import to Xena" optional="false"/>
+    <param format="str" type="text" name="cohort" label="Cohort" optional="false"/>
+    <param format="str" type="text" name="metadataType" label="Data Type (e.g. clinicalMatrix)" optional="false"/>
+  </inputs>
+  <help>
+    To Appear
+  </help>
+</tool>