Mercurial > repos > melissacline > ucsc_xena_platform

changeset 40:fd24e220f240

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author jingchunzhu <jingchunzhu@gmail.com>
date Mon, 27 Jul 2015 00:59:02 -0700
parents 066ae9df2d27
children 02b0824c7d60
files ucsc_xena_datapages.xml ucsc_xena_hub.xml xenaGetDataset.xml xena_import.xml
diffstat 4 files changed, 4 insertions(+), 16 deletions(-) [+]
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--- a/ucsc_xena_datapages.xml	Mon Jul 27 00:46:53 2015 -0700
+++ b/ucsc_xena_datapages.xml	Mon Jul 27 00:59:02 2015 -0700
@@ -1,12 +1,6 @@
 <?xml version="1.0"?>
-<!--
-    If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in
-    the initial response.  If value of 'URL_method' is 'post', any additional params coming back in the
-    initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed.
-   July 13, 2015
--->
 <tool name="Explore Data in Xena" id="ucsc_xenadatapages" tool_type="data_source">
-    <description>Browse the UCSC Xena Data Pages.</description>
+    <description>Browse data in the federated UCSC Xena platform</description>
     <command interpreter="python">ucsc_xena_download.py $genomic $__app__.config.output_size_limit</command>   
    <inputs action="https://genome-cancer.soe.ucsc.edu/proj/site/xena/datapages/" check_values="false" method="get">
          <display>Explore the data in Xena $GALAXY_URL</display>
--- a/ucsc_xena_hub.xml	Mon Jul 27 00:46:53 2015 -0700
+++ b/ucsc_xena_hub.xml	Mon Jul 27 00:59:02 2015 -0700
@@ -1,12 +1,6 @@
 <?xml version="1.0"?>
-<!--
-    If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in
-    the initial response.  If value of 'URL_method' is 'post', any additional params coming back in the
-    initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed.
-   July 13, 2015
--->
 <tool name="Xena Data Hub" id="ucsc_xenadatahub" tool_type="data_source">
-    <description>Select your Xena Data Hub</description>
+    <description>Build your Xena Data Hubs</description>
     <command interpreter="python">ucsc_xena_download.py $genomic $__app__.config.output_size_limit</command>   
     <inputs action="https://genome-cancer.soe.ucsc.edu/proj/site/xena/hub/" check_values="false" method="get">
         <display>Select your Xena Data Hub $GALAXY_URL</display>
--- a/xenaGetDataset.xml	Mon Jul 27 00:46:53 2015 -0700
+++ b/xenaGetDataset.xml	Mon Jul 27 00:59:02 2015 -0700
@@ -1,6 +1,6 @@
 <tool id="xenaGetDataset"  name="Get Data from Xena" version="0.0.2">
   <description>
-    Get a specified dataset and its associated metadata from the Xena database
+    Get a specified dataset and its associated metadata from the federated Xena platfrom
   </description>
   <requirements>
     <requirement type="package" version="1.0">installXena</requirement>
--- a/xena_import.xml	Mon Jul 27 00:46:53 2015 -0700
+++ b/xena_import.xml	Mon Jul 27 00:59:02 2015 -0700
@@ -1,5 +1,5 @@
 <tool id="xenaImport" name="XENA Import" version="0.0.1">
-  <description>Import a Galaxy dataset into the Xena Hub running on this galaxy instance</description>
+  <description>Import a Galaxy dataset into the Xena Server running on this galaxy instance</description>
   <requirements>
     <requirement type="package" version="1.0">installXena</requirement>
   </requirements>