Mercurial > repos > melissacline > ucsc_xena_platform

changeset 19:4a3c0e53d176

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Updating the xena urls
author melissacline
date Tue, 02 Jun 2015 15:04:28 -0700
parents 98b498545a52
children 3c735d06404b
files ucsc_xena_datapages.xml ucsc_xena_hub.xml ucsc_xenabrowser.xml
diffstat 3 files changed, 5 insertions(+), 5 deletions(-) [+]
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--- a/ucsc_xena_datapages.xml	Wed Jan 14 16:35:12 2015 -0800
+++ b/ucsc_xena_datapages.xml	Tue Jun 02 15:04:28 2015 -0700
@@ -7,8 +7,8 @@
 <tool name="Explore Data in Xena" id="ucsc_xenadatapages" tool_type="data_source">
     <description>Browse the UCSC Xena Data Pages.</description>
     <command interpreter="python">ucsc_xena_download.py $genomic $__app__.config.output_size_limit</command>   
-    <inputs action="https://tcga1.kilokluster.ucsc.edu/~jzhu/proj/site/hgHeatmap-cavm/datapages" check_values="false" method="get">
-        <display>Explore the data in Xena $GALAXY_URL</display>
+   <inputs action="https://genome-cancer.soe.ucsc.edu/proj/site/xena/datapages/" check_values="false" method="get">
+         <display>Explore the data in Xena $GALAXY_URL</display>
         <param name="GALAXY_URL" type="baseurl" value="/tool_runner" />
         <param name="tool_id" type="hidden" value="ucsc_xenadatapages" />
     </inputs>
--- a/ucsc_xena_hub.xml	Wed Jan 14 16:35:12 2015 -0800
+++ b/ucsc_xena_hub.xml	Tue Jun 02 15:04:28 2015 -0700
@@ -7,7 +7,7 @@
 <tool name="Xena Data Hub" id="ucsc_xenadatahub" tool_type="data_source">
     <description>Select your Xena Data Hub</description>
     <command interpreter="python">ucsc_xena_download.py $genomic $__app__.config.output_size_limit</command>   
-    <inputs action="https://genome-cancer.ucsc.edu/proj/site/hgHeatmap-cavm/hub/" check_values="false" method="get">
+    <inputs action="https://genome-cancer.soe.ucsc.edu/proj/site/xena/hub/" check_values="false" method="get">
         <display>Select your Xena Data Hub $GALAXY_URL</display>
         <param name="GALAXY_URL" type="baseurl" value="/tool_runner" />
         <param name="tool_id" type="hidden" value="ucsc_xenadatapages" />
--- a/ucsc_xenabrowser.xml	Wed Jan 14 16:35:12 2015 -0800
+++ b/ucsc_xenabrowser.xml	Tue Jun 02 15:04:28 2015 -0700
@@ -7,8 +7,8 @@
 <tool name="UCSC Xena Browser" id="ucsc_xenabrowser" tool_type="data_source">
     <description>Run the UCSC Xena Browser as a Galaxy tool.</description>
     <command interpreter="python">ucsc_xena_download.py $genomic $clinical $__app__.config.output_size_limit</command>   
-    <inputs action="https://genome-cancer.ucsc.edu/proj/site/hgHeatmap-cavm/" check_values="false" method="get">
-        <display>go to UCSC Xena Browser $GALAXY_URL</display>
+    <inputs action="https://genome-cancer.soe.ucsc.edu/proj/site/xena/heatmap/" check_values="false" method="get">
+         <display>go to UCSC Xena Browser $GALAXY_URL</display>
         <param name="GALAXY_URL" type="baseurl" value="/tool_runner" />
         <param name="tool_id" type="hidden" value="ucsc_xenabrowser" />
     </inputs>