Mercurial > repos > melissacline > ucsc_xena_platform
diff runXena.py @ 33:7ceb967147c3
start xena with no gui
add library files
author | jingchunzhu <jingchunzhu@gmail.com> |
---|---|
date | Wed, 22 Jul 2015 13:24:44 -0700 |
parents | 63b1ba1e3424 |
children | a3fbe077a14c |
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--- a/runXena.py Tue Jul 21 23:01:26 2015 -0700 +++ b/runXena.py Wed Jul 22 13:24:44 2015 -0700 @@ -12,6 +12,12 @@ import traceback import xena_utils as xena +dirname = os.path.dirname(os.path.abspath(sys.argv[0])) + +sys.path.insert(0, dirname + "/lockfile-0.10.2/") +sys.path.insert(0, dirname + "/python-daemon-2.0.5/") + + #third party libs from daemon import runner from lockfile import LockTimeout @@ -34,7 +40,7 @@ while True: #Main code goes here ... #Note that logger level needs to be set to logging.DEBUG before this shows up in the logs - xenaCmdline = "java -jar %s -r %s/files -d %s/db -t %s/tmp --logfile %s/xena.log -p %s -H 0.0.0.0" + xenaCmdline = "java -jar %s -r %s/files -d %s/db -t %s/tmp --no-gui --logfile %s/xena.log -p %s -H 0.0.0.0" xenaBaseDir = xena.baseDir() xenaCmd = xenaCmdline % (xena.jarPath(), xenaBaseDir, xenaBaseDir, xenaBaseDir,