Mercurial > repos > melissacline > ucsc_xena_platform
comparison ucsc_xenabrowser.xml @ 16:8ac29f84644b
Updated Xena URLs
author | melissacline |
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date | Tue, 02 Jun 2015 14:50:45 -0700 |
parents | 8bb037f88ed2 |
children | 154a9b440b63 |
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3:98b498545a52 | 16:8ac29f84644b |
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5 initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed. | 5 initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed. |
6 --> | 6 --> |
7 <tool name="UCSC Xena Browser" id="ucsc_xenabrowser" tool_type="data_source"> | 7 <tool name="UCSC Xena Browser" id="ucsc_xenabrowser" tool_type="data_source"> |
8 <description>Run the UCSC Xena Browser as a Galaxy tool.</description> | 8 <description>Run the UCSC Xena Browser as a Galaxy tool.</description> |
9 <command interpreter="python">ucsc_xena_download.py $genomic $clinical $__app__.config.output_size_limit</command> | 9 <command interpreter="python">ucsc_xena_download.py $genomic $clinical $__app__.config.output_size_limit</command> |
10 <inputs action="https://genome-cancer.ucsc.edu/proj/site/hgHeatmap-cavm/" check_values="false" method="get"> | 10 <inputs action="https://genome-cancer.ucsc.edu/proj/site/xena/heatmap/" check_values="false" method="get"> |
11 <display>go to UCSC Xena Browser $GALAXY_URL</display> | 11 <display>go to UCSC Xena Browser $GALAXY_URL</display> |
12 <param name="GALAXY_URL" type="baseurl" value="/tool_runner" /> | 12 <param name="GALAXY_URL" type="baseurl" value="/tool_runner" /> |
13 <param name="tool_id" type="hidden" value="ucsc_xenabrowser" /> | 13 <param name="tool_id" type="hidden" value="ucsc_xenabrowser" /> |
14 </inputs> | 14 </inputs> |
15 <request_param_translation> | 15 <request_param_translation> |