Mercurial > repos > melissacline > ucsc_xena_platform
comparison ucsc_xenabrowser.xml @ 39:066ae9df2d27
labeling descriptions edit
author | jingchunzhu <jingchunzhu@gmail.com> |
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date | Mon, 27 Jul 2015 00:46:53 -0700 |
parents | fc6f93710384 |
children | da86478b1d64 |
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38:1ef1886dae04 | 39:066ae9df2d27 |
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1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
2 <!-- | 2 <tool name="Xena Visualization" id="ucsc_xenabrowser" tool_type="data_source"> |
3 If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in | 3 <description>UCSC Xena Browser visualization</description> |
4 the initial response. If value of 'URL_method' is 'post', any additional params coming back in the | |
5 initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed. | |
6 July 13, 2015 | |
7 --> | |
8 <tool name="UCSC Xena Browser" id="ucsc_xenabrowser" tool_type="data_source"> | |
9 <description>Run the UCSC Xena Browser as a Galaxy tool.</description> | |
10 <command interpreter="python">ucsc_xena_download.py $genomic $clinical $__app__.config.output_size_limit</command> | 4 <command interpreter="python">ucsc_xena_download.py $genomic $clinical $__app__.config.output_size_limit</command> |
11 <inputs action="https://genome-cancer.soe.ucsc.edu/proj/site/xena/heatmap/" check_values="false" method="get"> | 5 <inputs action="https://genome-cancer.soe.ucsc.edu/proj/site/xena/heatmap/" check_values="false" method="get"> |
12 <display>go to UCSC Xena Browser $GALAXY_URL</display> | 6 <display>go to UCSC Xena Browser $GALAXY_URL</display> |
13 <param name="GALAXY_URL" type="baseurl" value="/tool_runner" /> | 7 <param name="GALAXY_URL" type="baseurl" value="/tool_runner" /> |
14 <param name="tool_id" type="hidden" value="ucsc_xenabrowser" /> | 8 <param name="tool_id" type="hidden" value="ucsc_xenabrowser" /> |