comparison ucsc_xenabrowser.xml @ 39:066ae9df2d27

labeling descriptions edit
author jingchunzhu <jingchunzhu@gmail.com>
date Mon, 27 Jul 2015 00:46:53 -0700
parents fc6f93710384
children da86478b1d64
comparison
equal deleted inserted replaced
38:1ef1886dae04 39:066ae9df2d27
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <!-- 2 <tool name="Xena Visualization" id="ucsc_xenabrowser" tool_type="data_source">
3 If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in 3 <description>UCSC Xena Browser visualization</description>
4 the initial response. If value of 'URL_method' is 'post', any additional params coming back in the
5 initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed.
6 July 13, 2015
7 -->
8 <tool name="UCSC Xena Browser" id="ucsc_xenabrowser" tool_type="data_source">
9 <description>Run the UCSC Xena Browser as a Galaxy tool.</description>
10 <command interpreter="python">ucsc_xena_download.py $genomic $clinical $__app__.config.output_size_limit</command> 4 <command interpreter="python">ucsc_xena_download.py $genomic $clinical $__app__.config.output_size_limit</command>
11 <inputs action="https://genome-cancer.soe.ucsc.edu/proj/site/xena/heatmap/" check_values="false" method="get"> 5 <inputs action="https://genome-cancer.soe.ucsc.edu/proj/site/xena/heatmap/" check_values="false" method="get">
12 <display>go to UCSC Xena Browser $GALAXY_URL</display> 6 <display>go to UCSC Xena Browser $GALAXY_URL</display>
13 <param name="GALAXY_URL" type="baseurl" value="/tool_runner" /> 7 <param name="GALAXY_URL" type="baseurl" value="/tool_runner" />
14 <param name="tool_id" type="hidden" value="ucsc_xenabrowser" /> 8 <param name="tool_id" type="hidden" value="ucsc_xenabrowser" />