|
0
|
1 <?xml version="1.0"?>
|
|
|
2 <!--
|
|
|
3 If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in
|
|
|
4 the initial response. If value of 'URL_method' is 'post', any additional params coming back in the
|
|
|
5 initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed.
|
|
|
6 -->
|
|
|
7 <tool name="Xena Data Hub" id="ucsc_xenadatahub" tool_type="data_source">
|
|
|
8 <description>Select your Xena Data Hub</description>
|
|
|
9 <command interpreter="python">ucsc_xena_download.py $genomic $__app__.config.output_size_limit</command>
|
|
|
10 <inputs action="https://genome-cancer.ucsc.edu/proj/site/hgHeatmap-cavm/hub/" check_values="false" method="get">
|
|
|
11 <display>Select your Xena Data Hub $GALAXY_URL</display>
|
|
|
12 <param name="GALAXY_URL" type="baseurl" value="/tool_runner" />
|
|
|
13 <param name="tool_id" type="hidden" value="ucsc_xenadatapages" />
|
|
|
14 </inputs>
|
|
|
15 <request_param_translation>
|
|
|
16 <request_param galaxy_name="URL_method" remote_name="URL_method" missing="get" />
|
|
|
17 <request_param galaxy_name="URL" remote_name="URL" missing="" />
|
|
|
18 </request_param_translation>
|
|
|
19 <uihints minwidth="800"/>
|
|
|
20 <outputs>
|
|
|
21 <data name="genomic" format="tabular" label="#echo $URL.rsplit('/',1)[1].rsplit('.',1)[0]+' genomic'" />
|
|
|
22 </outputs>
|
|
|
23 <options sanitize="False" refresh="True"/>
|
|
|
24 </tool>
|
