Mercurial > repos > melissacline > ucsc_cancer_utilities

view seg2matrix/getRefGene_hg19.sh @ 35:8ef79bd0be9a

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
modify
author jingchunzhu <jingchunzhu@gmail.com>
date Fri, 24 Jul 2015 16:14:36 -0700
parents ab20c0d04f4a
children
line wrap: on
line source

#!/bin/bash

curl -O http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/refGene.txt.gz
gunzip -c refGene.txt.gz > refGene_hg19
echo '{ "name" : "refGene_hg19", "type" : "genePredExt", "assembly" : "hg19", "url":"http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/refGene.txt.gz"}' > refGene_hg19.json