Mercurial > repos > melissacline > ucsc_cancer_utilities

diff segToGeneMatrix.xml @ 60:bf57076e27b9 default tip

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change genomicSegment input data
author jingchunzhu@gmail.com
date Tue, 27 Oct 2015 16:07:09 -0700
parents eef100efcc4c
children
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--- a/segToGeneMatrix.xml	Tue Sep 22 15:41:03 2015 -0700
+++ b/segToGeneMatrix.xml	Tue Oct 27 16:07:09 2015 -0700
@@ -30,14 +30,14 @@
 
 1. Input data file format: tab-deliminated
 
-   =======    =====  ======= ===== ====== ======
-   sample     chr    start   end   strand value
-   =======    =====  ======= ===== ====== ======
-   sample1    chr1   1       100   .      0.5
-   sample2    chr1   101     1000  .      1.5
-   sample3    chr1   1000    2000  .      -0.5
-   ...        ...    ...     ...   ...    ...
-   =======    =====  ======= ===== ====== ====== 
+   =======    =====  ======= ===== ======
+   sample     chr    start   end   value
+   =======    =====  ======= ===== ======
+   sample1    chr1   1       100   0.5
+   sample2    chr1   101     1000  1.5
+   sample3    chr1   1000    2000  -0.5
+   ...        ...    ...     ...   ...  
+   =======    =====  ======= ===== ====== 
 
 
 2. Output file: gene-level matrix file