Mercurial > repos > melissacline > ucsc_cancer_utilities

diff segToGeneMatrix.xml @ 40:72dc9215623d

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modify help
author jingchunzhu
date Fri, 31 Jul 2015 21:29:17 -0700
parents 61f03b481b0d
children 728eda331f07
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--- a/segToGeneMatrix.xml	Fri Jul 31 20:38:27 2015 -0700
+++ b/segToGeneMatrix.xml	Fri Jul 31 21:29:17 2015 -0700
@@ -1,6 +1,6 @@
 <tool id="segToGeneMatrix" name="segToGeneMatrix" version="0.0.1">
   <description>
-    Convert segmented copy number data to gene based matrix data
+    Convert segmented copy number data to gene-level matrix data
   </description>
   <command interpreter="python">
     seg2matrix/mapSegToGeneMatrix.py $input $__tool_directory__/seg2matrix/$refGene.assembly $outputMatrix
@@ -24,9 +24,8 @@
     <data name="outputMatrix" format="tabular" label="gene-level copy number matrix" />
   </outputs>
   <help>
-    ***Convert segmented copy number data for input into xena***
 
-    Given a segmented copy number data file, convert it into gene based matrix data
+    **Given a segmented copy number data file, convert it into gene-level matrix data, also xena ready**
 
     Output File no 1. matrix file