Mercurial > repos > melissacline > ucsc_cancer_utilities

diff seg2matrix/CGData/GeneMap.py @ 58:3e5680fecd7a

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accept chr1 and 1
author jingchunzhu
date Tue, 22 Sep 2015 15:16:19 -0700
parents ab20c0d04f4a
children
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line diff
--- a/seg2matrix/CGData/GeneMap.py	Fri Sep 18 11:11:15 2015 -0700
+++ b/seg2matrix/CGData/GeneMap.py	Tue Sep 22 15:16:19 2015 -0700
@@ -24,6 +24,7 @@
         """
         if cmp_func is None:
             cmp_func = self.cmp_func
+
         if not ref_gene.has_chrom(segment.chrom):
             return []
         chromList = ref_gene.get_chrom(segment.chrom)