Mercurial > repos > melissacline > ucsc_cancer_utilities

comparison mergeXenaMutation.py @ 41:9806198df91f

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fix
author jingchunzhu
date Thu, 06 Aug 2015 00:27:05 -0700
parents 914bc8ee6222
children 1093078e7976
comparison
equal deleted inserted replaced
40:72dc9215623d 41:9806198df91f
115 if line =="": 115 if line =="":
116 break 116 break
117 sample = string.split(line,'\t')[0] 117 sample = string.split(line,'\t')[0]
118 if sample not in sampleDic: 118 if sample not in sampleDic:
119 sampleDic[sample]=[] 119 sampleDic[sample]=[]
120 if inFile not in sampleDic[sample]: 120 if label not in sampleDic[sample]:
121 sampleDic[sample].append(label) 121 sampleDic[sample].append(label)
122 fin.close() 122 fin.close()
123 return 123 return
124 124
125 def outputSampleDic (sampleDic, outPhenotypeFile): 125 def outputSampleDic (sampleDic, outPhenotypeFile):