| Tue, 27 Oct 2015 16:07:09 -0700 |
jingchunzhu |
change genomicSegment input data
default tip
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| Tue, 22 Sep 2015 15:41:03 -0700 |
jingchunzhu |
fix
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| Tue, 22 Sep 2015 15:16:19 -0700 |
jingchunzhu |
accept chr1 and 1
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| Fri, 18 Sep 2015 11:11:15 -0700 |
jingchunzhu |
fix
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| Fri, 18 Sep 2015 11:03:59 -0700 |
jingchunzhu |
better instructions on browser
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| Fri, 18 Sep 2015 10:24:39 -0700 |
jingchunzhu |
merge mutation data conform to new mutationVector data standard
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| Thu, 17 Sep 2015 22:03:04 -0700 |
jingchunzhu |
introduce normal_CNV parameter
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| Thu, 17 Sep 2015 15:38:53 -0700 |
jingchunzhu |
fix
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| Thu, 17 Sep 2015 15:00:45 -0700 |
jingchunzhu |
better handle of input file
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| Thu, 17 Sep 2015 14:33:21 -0700 |
jingchunzhu |
better handle of input
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| Tue, 25 Aug 2015 23:42:17 -0700 |
jingchunzhu |
fix
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| Fri, 14 Aug 2015 00:17:55 -0700 |
jingchunzhu |
multiple files
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| Fri, 14 Aug 2015 00:04:41 -0700 |
jingchunzhu |
xena header
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| Thu, 13 Aug 2015 23:26:33 -0700 |
jingchunzhu |
parse snpEff output
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| Thu, 13 Aug 2015 21:49:03 -0700 |
jingchunzhu |
add snpEff code
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| Thu, 13 Aug 2015 21:48:02 -0700 |
jingchunzhu |
start vcfToXena
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| Fri, 07 Aug 2015 00:25:35 -0700 |
jingchunzhu |
fix
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| Fri, 07 Aug 2015 00:13:13 -0700 |
jingchunzhu |
improve messages
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| Thu, 06 Aug 2015 00:30:49 -0700 |
jingchunzhu |
fix
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| Thu, 06 Aug 2015 00:27:05 -0700 |
jingchunzhu |
fix
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| Fri, 31 Jul 2015 21:29:17 -0700 |
jingchunzhu |
modify help
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| Fri, 31 Jul 2015 20:38:27 -0700 |
jingchunzhu |
new tool
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| Fri, 31 Jul 2015 15:29:53 -0700 |
jingchunzhu |
modify
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| Mon, 27 Jul 2015 16:29:24 -0700 |
melissacline |
Updated synapseGetDataset to look at the filename rather than the (no longer existant) content type field to determine if the data is in zip format
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| Mon, 27 Jul 2015 15:55:22 -0700 |
melissacline |
Removing the dependency on synapseclient version, testing that...
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| Fri, 24 Jul 2015 16:14:36 -0700 |
jingchunzhu |
modify
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| Fri, 24 Jul 2015 14:56:37 -0700 |
jingchunzhu |
remove binary
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| Fri, 24 Jul 2015 14:50:34 -0700 |
jingchunzhu |
remove binary file
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| Fri, 24 Jul 2015 14:09:57 -0700 |
jingchunzhu |
change segToMatrix.xml location
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| Fri, 24 Jul 2015 13:10:11 -0700 |
jingchunzhu |
add seg2matrix tool
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| Wed, 22 Jul 2015 17:04:25 -0700 |
melissacline |
Rolling back synapseClient to version 1.0
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| Wed, 22 Jul 2015 16:59:35 -0700 |
melissacline |
Rolling the synapseClient dependency back to version 1.1
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| Wed, 22 Jul 2015 16:41:33 -0700 |
melissacline |
Rolling back synapseClient to version 1.2
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| Wed, 22 Jul 2015 16:25:40 -0700 |
melissacline |
Updating the synapse package version to 1.3
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| Mon, 20 Jul 2015 15:56:06 -0700 |
melissacline |
Trying without the install version specification for synapseClient
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| Mon, 20 Jul 2015 15:43:29 -0700 |
melissacline |
Fixing another merge conflict
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| Mon, 20 Jul 2015 15:41:22 -0700 |
melissacline |
Fixing a merge conflict
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| Mon, 20 Jul 2015 15:33:07 -0700 |
melissacline |
Fixed uppercase/lowercase mismatch problem
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| Mon, 20 Jul 2015 15:24:46 -0700 |
melissacline |
Rolled the synapseClient dependency back to version 1.0
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| Fri, 20 Mar 2015 16:38:46 -0700 |
melissacline |
Merged with head, tweaked labels on merge mutation data tool
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| Fri, 20 Mar 2015 15:50:22 -0700 |
melissacline |
Debugged the merge mutation data tool
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| Fri, 20 Mar 2015 18:09:15 -0400 |
melissacline |
Uploaded
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| Fri, 20 Mar 2015 18:08:54 -0400 |
melissacline |
Uploaded
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| Fri, 20 Mar 2015 14:22:02 -0700 |
melissacline |
Cleaned up the output dataset names for Merge Genomic Datasets
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| Tue, 10 Mar 2015 19:37:47 -0700 |
melissacline |
Trying to get out of merge hell
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| Tue, 10 Mar 2015 19:35:51 -0700 |
melissacline |
Trying one more thing for synapse versioning
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| Tue, 10 Mar 2015 19:32:14 -0700 |
melissacline |
Committing changes that hadn't made it in yet, merge hell
|
| Tue, 10 Mar 2015 19:29:10 -0700 |
melissacline |
Setting the explicing synapse client version to 1.2
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| Tue, 10 Mar 2015 19:25:49 -0700 |
melissacline |
Trying again to commit missing changes...
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| Tue, 10 Mar 2015 19:23:40 -0700 |
melissacline |
Experimenting with no version info in the tool dependencies
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| Tue, 10 Mar 2015 19:15:25 -0700 |
melissacline |
Removed an extraneous line of code from the last revision
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| Tue, 10 Mar 2015 19:12:38 -0700 |
melissacline |
Updated the synapseclient version number
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| Tue, 10 Mar 2015 11:16:56 -0700 |
melissacline |
When opening files for reading, changed the open() mode from 'r' to 'U' to accommodate non-unix systems
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| Mon, 09 Mar 2015 19:58:03 -0700 |
melissacline |
Expanded the functionality of the merge genomic datasets tool, to generate an output dataset with the file (or label) indicating where each column came from
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| Thu, 12 Feb 2015 01:15:58 -0500 |
melissacline |
Uploaded
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| Thu, 12 Feb 2015 01:15:30 -0500 |
melissacline |
Uploaded
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| Wed, 11 Feb 2015 17:28:52 -0800 |
melissacline |
Added a proper first line
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| Wed, 11 Feb 2015 16:44:33 -0800 |
melissacline |
Creating a tool to merge genomic datasets
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| Tue, 27 Jan 2015 17:23:38 -0800 |
melissacline |
Trying one more time to get this push to happen...
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| Tue, 27 Jan 2015 16:49:56 -0800 |
melissacline |
Updated synapseGetDataset.py to automatically unzip if the file downloaded is a zip archive.
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