# HG changeset patch
# User melissacline
# Date 1411529958 25200
# Node ID c1388ebe86625377f4a74c8c4b0ec9f5381a71b6
# Parent  733fa93086c5c33d8a481984766535ce2093d6ca
Fixed an XML bug in the tool wrapper

diff -r 733fa93086c5 -r c1388ebe8662 startXena.py
--- a/startXena.py	Tue Sep 23 20:08:36 2014 -0700
+++ b/startXena.py	Tue Sep 23 20:39:18 2014 -0700
@@ -34,9 +34,9 @@
    xenaJarPath = os.path.join(jarPath, "xena.jar")
    xenaBaseDir = os.getenv("XENA_BASE_DIR", "~")
    xenaPort = os.getenv("XENA_PORT", 1236)
-   cmdline = "java -jar %s -r %s/files -d %s/db -t %s/tmp -p %d" % (xenaJarPath, xenaBaseDir, 
-                                                                    xenaBaseDir, xenaBaseDir,
-                                                                    xenaPort)
+   cmdline = "java -jar %s -r %s/files -d %s/db -t %s/tmp -p %d -H 0.0.0.0" % (xenaJarPath, xenaBaseDir, 
+                                                                               xenaBaseDir, xenaBaseDir,
+                                                                               xenaPort)
    for ii in range(1,len(sys.argv)):
        cmdline = "%s %s" % (cmdline, sys.argv[ii])
    cmd += " &"
diff -r 733fa93086c5 -r c1388ebe8662 xena.xml
--- a/xena.xml	Tue Sep 23 20:08:36 2014 -0700
+++ b/xena.xml	Tue Sep 23 20:39:18 2014 -0700
@@ -4,7 +4,7 @@
    <requirement type="package" version="1.0">installXena</requirement>
  </requirements>
   <command interpreter="python">
-    startXena.py   -H 0.0.0.0 &amp >&amp $outfile;
+    startXena.py  > $outfile
   </command>
   <outputs>
     <data format="txt" name="outfile"/>