Mercurial > repos > mbernt > singularity_scriptrunner
diff tool-data/scripting_images.loc @ 0:3d41fa089db7 draft
planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 9e9a0860d255a1fd6c43edd0fde9ea538ee679de
| author | mbernt |
|---|---|
| date | Sun, 06 Aug 2023 15:20:57 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/scripting_images.loc Sun Aug 06 15:20:57 2023 +0000 @@ -0,0 +1,20 @@ +# the following six tab separated columns need to be set +# +# id +# a unique id to be used +# name +# name shown to the user +# image_name +# a path or URL to an image to use. Note that when using URLs +# it images will be pulled on the fly to the job working dir +# and the user executing the tools needs to take care of the +# image cache. +# interpreter +# the interpreter that should be applied to the user supplied scripts +# container_type +# apptainer/singularity +# container_params +# parameters to be passed to singularity/apptainer +# --cleanenv --network none --no-mount bind-paths --cpus "\${GALAXY_SLOTS:-1}" +# +# <id>\t<name>\t<image_name>\t<interpreter>\t<container_type>\t<container_params>