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planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 5c71b60920e887c5fdb2c0ca0118927b1231bde7
author mbernt
date Sun, 06 Aug 2023 16:01:26 +0000
parents 3d41fa089db7
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3d41fa089db7 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 9e9a0860d255a1fd6c43edd0fde9ea538ee679de
mbernt
parents:
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1 # <id> <name> <image_name> <interpreter> <container_type> <container_params>
3d41fa089db7 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 9e9a0860d255a1fd6c43edd0fde9ea538ee679de
mbernt
parents:
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3d41fa089db7 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 9e9a0860d255a1fd6c43edd0fde9ea538ee679de
mbernt
parents:
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3 # docker://continuumio/anaconda3
3d41fa089db7 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 9e9a0860d255a1fd6c43edd0fde9ea538ee679de
mbernt
parents:
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4 python_continuumio_anaconda python (continuumio/anaconda) /tmp/anaconda3_latest.sif python singularity --cleanenv --network none --no-mount bind-paths
3d41fa089db7 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 9e9a0860d255a1fd6c43edd0fde9ea538ee679de
mbernt
parents:
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3d41fa089db7 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 9e9a0860d255a1fd6c43edd0fde9ea538ee679de
mbernt
parents:
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6 # docker://rocker/tidyverse
3d41fa089db7 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 9e9a0860d255a1fd6c43edd0fde9ea538ee679de
mbernt
parents:
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7 r_rocker_tidyverse R (tidyverse) /tmp/tidyverse_latest.sif Rscript apptainer
3d41fa089db7 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 9e9a0860d255a1fd6c43edd0fde9ea538ee679de
mbernt
parents:
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3d41fa089db7 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 9e9a0860d255a1fd6c43edd0fde9ea538ee679de
mbernt
parents:
diff changeset
9 # docker://rocker/tidyverse
3d41fa089db7 planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 9e9a0860d255a1fd6c43edd0fde9ea538ee679de
mbernt
parents:
diff changeset
10 bash_continuumio_anaconda bash (continuumio/anaconda) /tmp/anaconda3_latest.sif bash apptainer --cleanenv --network none --no-mount bind-paths