diff converter_dta_to_csv.py @ 4:7c2cca12ab39 draft

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/converter_dta_to_csv.py	Wed Nov 20 07:15:38 2013 -0500
@@ -0,0 +1,44 @@
+#Converter of dta to csv
+#M.Baak
+#9-10-2013
+#last update: 13-11-2013
+
+
+import sys
+import os
+
+file_name = sys.argv[1]
+file_outputname = sys.argv[2]
+file_outputname2 = sys.argv[3]
+
+def convert_dta(file_name,file_outputname):
+    
+    read_file = open(file_name, 'r') #open file
+    a = len(read_file.readlines())
+    read_file2 = open(file_name, 'r') # open file second time
+    output = open(file_outputname,'w') #output file
+    output2 = open(file_outputname2, 'w')
+
+    numberlandmarks = 0
+    header = "" 
+
+    #for loop, coordinates, number of landmarks and name of sample will be stored in csv format
+    for x in range(0,a):
+        b = read_file2.readline().strip()
+        split_tabs = b.split('  ')
+        number_columns = len(split_tabs)
+        if x == 0:
+            header += b.replace(' ', '_')     #name of sample     
+        if number_columns == 3: #coordinates
+            output.write("%f,%f,%f\n"%(float(split_tabs[0]),float(split_tabs[1]),float(split_tabs[2])))
+            numberlandmarks += 1 # number of landmarks
+
+    output2.write("%s\n"%(header[1:-4])) # writing header to output file
+
+    output.close()
+
+convert_dta(file_name,file_outputname)
+            
+
+            
+