Mercurial > repos > matthias > stacks2_ustacks

comparison test-data/refmap/populations.log.distribs @ 6:742c94cfb8cf draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit f507c4eaca0fe04e730d7c3bbb9e9d2488239a9f
author matthias
date Thu, 20 Jun 2019 08:10:32 -0400
parents ccbb048a4178
children
comparison
equal deleted inserted replaced
5:ccbb048a4178 6:742c94cfb8cf
19 END batch_progress 19 END batch_progress
20 20
21 BEGIN samples_per_loc_prefilters 21 BEGIN samples_per_loc_prefilters
22 # Distribution of valid samples matched to a catalog locus prior to filtering. 22 # Distribution of valid samples matched to a catalog locus prior to filtering.
23 n_samples n_loci 23 n_samples n_loci
24 0 13 24 2 13
25 END samples_per_loc_prefilters 25 END samples_per_loc_prefilters
26 26
27 BEGIN missing_samples_per_loc_prefilters 27 BEGIN missing_samples_per_loc_prefilters
28
29 # Distribution of missing samples for each catalog locus prior to filtering. 28 # Distribution of missing samples for each catalog locus prior to filtering.
30 # Absent samples at locus Count 29 # Absent samples at locus Count
31 2 13 30 0 13
32 END missing_samples_per_loc_prefilters 31 END missing_samples_per_loc_prefilters
33 32
34 BEGIN snps_per_loc_prefilters 33 BEGIN snps_per_loc_prefilters
35 # Distribution of the number of SNPs per catalog locus prior to filtering. 34 # Distribution of the number of SNPs per catalog locus prior to filtering.
36 n_snps n_loci 35 n_snps n_loci
39 END snps_per_loc_prefilters 38 END snps_per_loc_prefilters
40 39
41 BEGIN samples_per_loc_postfilters 40 BEGIN samples_per_loc_postfilters
42 # Distribution of valid samples matched to a catalog locus after filtering. 41 # Distribution of valid samples matched to a catalog locus after filtering.
43 n_samples n_loci 42 n_samples n_loci
44 0 13 43 2 13
45 END samples_per_loc_postfilters 44 END samples_per_loc_postfilters
46 45
47 BEGIN missing_samples_per_loc_postfilters 46 BEGIN missing_samples_per_loc_postfilters
48
49 # Distribution of missing samples for each catalog locus after filtering. 47 # Distribution of missing samples for each catalog locus after filtering.
50 # Absent samples at locus Count 48 # Absent samples at locus Count
51 2 13 49 0 13
52 END missing_samples_per_loc_postfilters 50 END missing_samples_per_loc_postfilters
53 51
54 BEGIN snps_per_loc_postfilters 52 BEGIN snps_per_loc_postfilters
55 # Distribution of the number of SNPs per catalog locus (after filtering). 53 # Distribution of the number of SNPs per catalog locus (after filtering).
56 n_snps n_loci 54 n_snps n_loci