Mercurial > repos > matthias > stacks2_tsv2bam

comparison test-data/populations/populations.samples.fa @ 4:60c1c4d7d2c1 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 4e87a14a5479800df9675c1cbcdbe1b11f63653b-dirty
author matthias
date Wed, 27 Feb 2019 09:53:30 -0500
parents 99d0b19ef534
children 852044374da1
comparison
equal deleted inserted replaced
3:56eb0bc12179 4:60c1c4d7d2c1
1 Stacks version 2.2; November 28, 2018 1 Stacks version 2.3b; February 25, 2019
2 >CLocus_1_Sample_1_Locus_1_Allele_0 [PopA_01] 2 >CLocus_1_Sample_1_Locus_1_Allele_0 [PopA_01]
3 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATAATCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGCGAGAC 3 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATAATCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGCGAGACNNNNNNNNNNCGTCAGAGGGCTTATATCGTGAGTGATAGCAGCAGTTTCTCTCTACCACATAGTTATACACCATTGGGCCAGCTCGTTGAAAACTACTGATGCTGATCGG
4 >CLocus_1_Sample_1_Locus_1_Allele_1 [PopA_01] 4 >CLocus_1_Sample_1_Locus_1_Allele_1 [PopA_01]
5 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATACTCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGAGAGAC 5 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATACTCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGAGAGACNNNNNNNNNNCGTCAGAGGGCTTATATCGTGAGTGATAGCAGCAGTTTCTCTCTACCACATAGTTATACACCATTGGGCCAGCTCGTTGAAAACTACTGATGCTGATCGG
6 >CLocus_1_Sample_2_Locus_1_Allele_0 [PopA_02] 6 >CLocus_1_Sample_2_Locus_1_Allele_0 [PopA_02]
7 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATAATCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGCGAGAC 7 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATAATCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGCGAGACNNNNNNNNNNCGTCAGAGGGCTTATATCGTGAGTGATAGCAGCAGTTTCTCTCTACCACATAGTTATACACCATTGGGCCAGCTCGTTGAAAACTACTGATGCTGATCGG
8 >CLocus_1_Sample_2_Locus_1_Allele_1 [PopA_02] 8 >CLocus_1_Sample_2_Locus_1_Allele_1 [PopA_02]
9 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATACTCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGAGAGAC 9 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATACTCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGAGAGACNNNNNNNNNNCGTCAGAGGGCTTATATCGTGAGTGATAGCAGCAGTTTCTCTCTACCACATAGTTATACACCATTGGGCCAGCTCGTTGAAAACTACTGATGCTGATCGG
10 >CLocus_2_Sample_1_Locus_2_Allele_0 [PopA_01] 10 >CLocus_2_Sample_1_Locus_2_Allele_0 [PopA_01]
11 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGA 11 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGANNNNNNNNNNGGCTGCTGGACGTCCTTCGCTCGGTACCTTGACTGGATTACATAGCATTCCTGAGTTCACGGCCAATATCGCCAACCGTTGAGTGAGTTTAGTGAACCGG
12 >CLocus_2_Sample_1_Locus_2_Allele_1 [PopA_01] 12 >CLocus_2_Sample_1_Locus_2_Allele_1 [PopA_01]
13 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGA 13 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGANNNNNNNNNNGGCTGCTGGACGTCCTTCGCTCGGTACCTTGACTGGATTATATAGCATTCCTTAGTTCACGGCCAATATCGCCAACCGTTGAGTGAGTTTAGTGAACCGG
14 >CLocus_2_Sample_2_Locus_2_Allele_0 [PopA_02] 14 >CLocus_2_Sample_2_Locus_2_Allele_0 [PopA_02]
15 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGA 15 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGANNNNNNNNNNGGCTGCTGGACGTCCTTCGCTCGGTACCTTGACTGGATTACATAGCATTCCTGAGTTCACGGCCAATATCGCCAACCGTTGAGTGAGTTTAGTGAACCGG
16 >CLocus_2_Sample_2_Locus_2_Allele_1 [PopA_02] 16 >CLocus_2_Sample_2_Locus_2_Allele_1 [PopA_02]
17 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGA 17 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGANNNNNNNNNNGGCTGCTGGACGTCCTTCGCTCGGTACCTTGACTGGATTATATAGCATTCCTTAGTTCACGGCCAATATCGCCAACCGTTGAGTGAGTTTAGTGAACCGG
18 >CLocus_3_Sample_1_Locus_3_Allele_0 [PopA_01] 18 >CLocus_3_Sample_1_Locus_3_Allele_0 [PopA_01]
19 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTAT 19 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTATNNNNNNNNNNTACGACGAGCAATCCACAGACCTAGGCCCATCGAAGCGTCTTATGATTGATAACATCAGAGGGGGATGGGAGGTCCTGCTGTCGCATGGGAGAATACACGG
20 >CLocus_3_Sample_1_Locus_3_Allele_1 [PopA_01] 20 >CLocus_3_Sample_1_Locus_3_Allele_1 [PopA_01]
21 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTAT 21 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTATNNNNNNNNNNTACGACGAGCAATCCACAGACCTAGGCCCATCGAAGCGTCTTATGATTGATAACATCAGAGGGGGATGGGAGGTCCTGCTGTCGCATGGGAGAATACACGG
22 >CLocus_3_Sample_2_Locus_3_Allele_0 [PopA_02] 22 >CLocus_3_Sample_2_Locus_3_Allele_0 [PopA_02]
23 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTAT 23 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTATNNNNNNNNNNTACGACGAGCAATCCACAGACCTAGGCCCATCGAAGCGTCTTATGATTGATAACATCAAAGGGGGATGGGAGGTCCTACTGTCGCATGGGAGAATACACGG
24 >CLocus_3_Sample_2_Locus_3_Allele_1 [PopA_02] 24 >CLocus_3_Sample_2_Locus_3_Allele_1 [PopA_02]
25 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTAT 25 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTATNNNNNNNNNNTACGACGAGCAATCCACAGACCTAGGCCCATCGAAGCGTCTTATGATTGATAACATCAGAGGGGGATGGGAGGTCCTGCTGTCGCATGGGAGAATACACGG