Mercurial > repos > matthias > stacks2_shortreads

annotate test-data/gstacks/catalog.calls.tsv @ 3:756e003f0eb1 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit c42d129928cfd153ba7a922368c8e76e79b242b2
author matthias
date Fri, 04 Jan 2019 03:32:10 -0500
parents 061c9e133d1e
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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061c9e133d1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 98327d2948ae1ccb5aef5db9ab88605fd74a0de7-dirty
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1 ##fileformat=VCFv4.2
061c9e133d1e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 98327d2948ae1ccb5aef5db9ab88605fd74a0de7-dirty
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2 ##fileDate=20181127
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3 ##source="Stacks v2.2"
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4 ##INFO=<ID=AD,Number=R,Type=Integer,Description="Total Depth for Each Allele">
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5 ##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
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6 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
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7 ##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of Samples With Data">
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8 ##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allele Depth">
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9 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
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10 ##FORMAT=<ID=HQ,Number=2,Type=Integer,Description="Haplotype Quality">
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11 ##FORMAT=<ID=GL,Number=G,Type=Float,Description="Genotype Likelihood">
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12 ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
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13 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
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14 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT PopA_01 PopA_02
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