view test-data/populations/populations.log.distribs @ 0:a4e62d5c5101 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 98327d2948ae1ccb5aef5db9ab88605fd74a0de7-dirty

# Note: Individual distributions can be extracted using the `stacks-dist-extract` utility.
#       e.g. `stacks-dist-extract populations.log.distribs dist_name`

BEGIN batch_progress
Batch 1: analyzed 3 loci; filtered 0 loci; 3 loci seen.
END batch_progress

BEGIN samples_per_loc_prefilters
# Distribution of valid samples matched to a catalog locus prior to filtering.
n_samples	n_loci
0	3
END samples_per_loc_prefilters

BEGIN missing_samples_per_loc_prefilters

# Distribution of missing samples for each catalog locus prior to filtering.
# Absent samples at locus	Count
2	3
END missing_samples_per_loc_prefilters

BEGIN snps_per_loc_prefilters
# Distribution of the number of SNPs per catalog locus prior to filtering.
n_snps	n_loci
0	2
2	1
END snps_per_loc_prefilters

BEGIN samples_per_loc_postfilters
# Distribution of valid samples matched to a catalog locus after filtering.
n_samples	n_loci
0	3
END samples_per_loc_postfilters

BEGIN missing_samples_per_loc_postfilters

# Distribution of missing samples for each catalog locus after filtering.
# Absent samples at locus	Count
2	3
END missing_samples_per_loc_postfilters

BEGIN snps_per_loc_postfilters
# Distribution of the number of SNPs per catalog locus (after filtering).
n_snps	n_loci
0	2
2	1
END snps_per_loc_postfilters