Mercurial > repos > matthias > stacks2_gstacks
comparison test-data/populations/populations.samples-raw.fa @ 4:285e1f85c11a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 4e87a14a5479800df9675c1cbcdbe1b11f63653b-dirty
| author | matthias |
|---|---|
| date | Wed, 27 Feb 2019 09:56:44 -0500 |
| parents | ce90584be117 |
| children | aa645d419016 |
comparison
equal
deleted
inserted
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| 3:5421b9528827 | 4:285e1f85c11a |
|---|---|
| 1 Stacks version 2.2; November 28, 2018 | 1 Stacks version 2.3b; February 25, 2019 |
| 2 >CLocus_1_Sample_1_Locus_1_Allele_0 [PopA_01] | 2 >CLocus_1_Sample_1_Locus_1_Allele_0 [PopA_01] |
| 3 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATAATCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGCGAGAC | 3 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATAATCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGCGAGACNNNNNNNNNNCGTCAGAGGGCTTATATCGTGAGTGATAGCAGCAGTTTCTCTCTACCACATAGTTATACACCATTGGGCCAGCTCGTTGAAAACTACTGATGCTGATCGG |
| 4 >CLocus_1_Sample_1_Locus_1_Allele_1 [PopA_01] | 4 >CLocus_1_Sample_1_Locus_1_Allele_1 [PopA_01] |
| 5 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATACTCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGAGAGAC | 5 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATACTCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGAGAGACNNNNNNNNNNCGTCAGAGGGCTTATATCGTGAGTGATAGCAGCAGTTTCTCTCTACCACATAGTTATACACCATTGGGCCAGCTCGTTGAAAACTACTGATGCTGATCGG |
| 6 >CLocus_1_Sample_2_Locus_1_Allele_0 [PopA_02] | 6 >CLocus_1_Sample_2_Locus_1_Allele_0 [PopA_02] |
| 7 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATAATCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGCGAGAC | 7 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATAATCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGCGAGACNNNNNNNNNNCGTCAGAGGGCTTATATCGTGAGTGATAGCAGCAGTTTCTCTCTACCACATAGTTATACACCATTGGGCCAGCTCGTTGAAAACTACTGATGCTGATCGG |
| 8 >CLocus_1_Sample_2_Locus_1_Allele_1 [PopA_02] | 8 >CLocus_1_Sample_2_Locus_1_Allele_1 [PopA_02] |
| 9 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATACTCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGAGAGAC | 9 AATTCGTTTGCTGCTTCAGGAATCTCTCGTATACTCTGAGTATGTGCGTACGTACGCTATTTAGATGGATAACCGACGCTGCCAGACGAGAGACNNNNNNNNNNCGTCAGAGGGCTTATATCGTGAGTGATAGCAGCAGTTTCTCTCTACCACATAGTTATACACCATTGGGCCAGCTCGTTGAAAACTACTGATGCTGATCGG |
| 10 >CLocus_2_Sample_1_Locus_2_Allele_0 [PopA_01] | 10 >CLocus_2_Sample_1_Locus_2_Allele_0 [PopA_01] |
| 11 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGA | 11 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGANNNNNNNNNNGGCTGCTGGACGTCCTTCGCTCGGTACCTTGACTGGATTACATAGCATTCCTGAGTTCACGGCCAATATCGCCAACCGTTGAGTGAGTTTAGTGAACCGG |
| 12 >CLocus_2_Sample_1_Locus_2_Allele_1 [PopA_01] | |
| 13 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGANNNNNNNNNNGGCTGCTGGACGTCCTTCGCTCGGTACCTTGACTGGATTATATAGCATTCCTTAGTTCACGGCCAATATCGCCAACCGTTGAGTGAGTTTAGTGAACCGG | |
| 12 >CLocus_2_Sample_2_Locus_2_Allele_0 [PopA_02] | 14 >CLocus_2_Sample_2_Locus_2_Allele_0 [PopA_02] |
| 13 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGA | 15 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGANNNNNNNNNNGGCTGCTGGACGTCCTTCGCTCGGTACCTTGACTGGATTACATAGCATTCCTGAGTTCACGGCCAATATCGCCAACCGTTGAGTGAGTTTAGTGAACCGG |
| 16 >CLocus_2_Sample_2_Locus_2_Allele_1 [PopA_02] | |
| 17 AATTCTCTACACCACAGCATCAATTCTAAAAATGACTACCAGAGAGACAACTCCGCAGTTAAACACTCTGACTGCCACGCCAGCTACCTCTAGANNNNNNNNNNGGCTGCTGGACGTCCTTCGCTCGGTACCTTGACTGGATTATATAGCATTCCTTAGTTCACGGCCAATATCGCCAACCGTTGAGTGAGTTTAGTGAACCGG | |
| 14 >CLocus_3_Sample_1_Locus_3_Allele_0 [PopA_01] | 18 >CLocus_3_Sample_1_Locus_3_Allele_0 [PopA_01] |
| 15 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTAT | 19 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTATNNNNNNNNNNTACGACGAGCAATCCACAGACCTAGGCCCATCGAAGCGTCTTATGATTGATAACATCAGAGGGGGATGGGAGGTCCTGCTGTCGCATGGGAGAATACACGG |
| 20 >CLocus_3_Sample_1_Locus_3_Allele_1 [PopA_01] | |
| 21 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTATNNNNNNNNNNTACGACGAGCAATCCACAGACCTAGGCCCATCGAAGCGTCTTATGATTGATAACATCAGAGGGGGATGGGAGGTCCTGCTGTCGCATGGGAGAATACACGG | |
| 16 >CLocus_3_Sample_2_Locus_3_Allele_0 [PopA_02] | 22 >CLocus_3_Sample_2_Locus_3_Allele_0 [PopA_02] |
| 17 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTAT | 23 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTATNNNNNNNNNNTACGACGAGCAATCCACAGACCTAGGCCCATCGAAGCGTCTTATGATTGATAACATCAAAGGGGGATGGGAGGTCCTACTGTCGCATGGGAGAATACACGG |
| 24 >CLocus_3_Sample_2_Locus_3_Allele_1 [PopA_02] | |
| 25 AATTCGGCTTGCAACGCAAGTGACGATTCCCACGGACATAACTGATCTAAGTAACTTCCAAATCTGGGAATGGGATTTCATAATTAAGGACTATNNNNNNNNNNTACGACGAGCAATCCACAGACCTAGGCCCATCGAAGCGTCTTATGATTGATAACATCAGAGGGGGATGGGAGGTCCTGCTGTCGCATGGGAGAATACACGG |