Mercurial > repos > matthias > stacks2_denovomap

diff test-data/populations/populations.haps.vcf @ 4:a70c766ce64f draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit 4e87a14a5479800df9675c1cbcdbe1b11f63653b-dirty
author matthias
date Wed, 27 Feb 2019 09:55:08 -0500
parents e5e5617c064a
children 3680074758c5
line wrap: on
line diff
--- a/test-data/populations/populations.haps.vcf	Fri Jan 04 03:33:53 2019 -0500
+++ b/test-data/populations/populations.haps.vcf	Wed Feb 27 09:55:08 2019 -0500
@@ -1,6 +1,6 @@
 ##fileformat=VCFv4.2
-##fileDate=20181128
-##source="Stacks v2.2"
+##fileDate=20190225
+##source="Stacks v2.3b"
 ##INFO=<ID=AD,Number=R,Type=Integer,Description="Total Depth for Each Allele">
 ##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
@@ -14,3 +14,5 @@
 ##INFO=<ID=loc_strand,Number=1,Type=Character,Description="Genomic strand the corresponding Stacks locus aligns on">
 #CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	PopA_01	PopA_02
 1	1	.	AC	CA	.	PASS	snp_columns=34,89	GT	0/1	0/1
+2	1	.	CG	TT	.	PASS	snp_columns=145,157	GT	0/1	0/1
+3	1	.	GG	AA	.	PASS	snp_columns=163,182	GT	0/0	0/1