diff test-data/populations/populations.sumstats.tsv @ 5:3680074758c5 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit f507c4eaca0fe04e730d7c3bbb9e9d2488239a9f
author matthias
date Thu, 20 Jun 2019 08:14:41 -0400
parents a70c766ce64f
children
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--- a/test-data/populations/populations.sumstats.tsv	Wed Feb 27 09:55:08 2019 -0500
+++ b/test-data/populations/populations.sumstats.tsv	Thu Jun 20 08:14:41 2019 -0400
@@ -1,8 +1,8 @@
 # 1	PopA_01,PopA_02
 # Locus ID	Chr	BP	Col	Pop ID	P Nuc	Q Nuc	N	P	Obs Het	Obs Hom	Exp Het	Exp Hom	Pi	Smoothed Pi	Smoothed Pi P-value	Fis	Smoothed Fis	Smoothed Fis P-value	HWE P-value	Private
-1	un	35	33	1	A	C	2	0.50000000	1.00000	0.00000	0.50000	0.50000	0.66667	0.00000	0.00000	-0.50000	0.00000	0.00000	0.00000	0
-1	un	90	88	1	A	C	2	0.50000000	1.00000	0.00000	0.50000	0.50000	0.66667	0.00000	0.00000	-0.50000	0.00000	0.00000	0.00000	0
-2	un	350	144	1	C	T	2	0.50000000	1.00000	0.00000	0.50000	0.50000	0.66667	0.00000	0.00000	-0.50000	0.00000	0.00000	0.00000	0
-2	un	362	156	1	G	T	2	0.50000000	1.00000	0.00000	0.50000	0.50000	0.66667	0.00000	0.00000	-0.50000	0.00000	0.00000	0.00000	0
-3	un	572	162	1	G	A	2	0.75000000	0.50000	0.50000	0.37500	0.62500	0.50000	0.00000	0.00000	0.00000	0.00000	0.00000	0.00000	0
-3	un	591	181	1	G	A	2	0.75000000	0.50000	0.50000	0.37500	0.62500	0.50000	0.00000	0.00000	0.00000	0.00000	0.00000	0.00000	0
+1	un	34	33	1	A	C	2	0.50000000	1.00000	0.00000	0.50000	0.50000	0.66667	0.00000	0.00000	-0.50000	0.00000	0.00000	0.00000	0
+1	un	89	88	1	A	C	2	0.50000000	1.00000	0.00000	0.50000	0.50000	0.66667	0.00000	0.00000	-0.50000	0.00000	0.00000	0.00000	0
+2	un	367	162	1	G	A	2	0.75000000	0.50000	0.50000	0.37500	0.62500	0.50000	0.00000	0.00000	0.00000	0.00000	0.00000	0.00000	0
+2	un	386	181	1	G	A	2	0.75000000	0.50000	0.50000	0.37500	0.62500	0.50000	0.00000	0.00000	0.00000	0.00000	0.00000	0.00000	0
+3	un	554	144	1	C	T	2	0.50000000	1.00000	0.00000	0.50000	0.50000	0.66667	0.00000	0.00000	-0.50000	0.00000	0.00000	0.00000	0
+3	un	566	156	1	G	T	2	0.50000000	1.00000	0.00000	0.50000	0.50000	0.66667	0.00000	0.00000	-0.50000	0.00000	0.00000	0.00000	0