Mercurial > repos > matthias > stacks2_denovomap

comparison test-data/populations/populations.log.distribs @ 5:3680074758c5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit f507c4eaca0fe04e730d7c3bbb9e9d2488239a9f
author matthias
date Thu, 20 Jun 2019 08:14:41 -0400
parents a70c766ce64f
children
comparison
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4:a70c766ce64f 5:3680074758c5
6 END batch_progress 6 END batch_progress
7 7
8 BEGIN samples_per_loc_prefilters 8 BEGIN samples_per_loc_prefilters
9 # Distribution of valid samples matched to a catalog locus prior to filtering. 9 # Distribution of valid samples matched to a catalog locus prior to filtering.
10 n_samples n_loci 10 n_samples n_loci
11 0 3 11 2 3
12 END samples_per_loc_prefilters 12 END samples_per_loc_prefilters
13 13
14 BEGIN missing_samples_per_loc_prefilters 14 BEGIN missing_samples_per_loc_prefilters
15
16 # Distribution of missing samples for each catalog locus prior to filtering. 15 # Distribution of missing samples for each catalog locus prior to filtering.
17 # Absent samples at locus Count 16 # Absent samples at locus Count
18 2 3 17 0 3
19 END missing_samples_per_loc_prefilters 18 END missing_samples_per_loc_prefilters
20 19
21 BEGIN snps_per_loc_prefilters 20 BEGIN snps_per_loc_prefilters
22 # Distribution of the number of SNPs per catalog locus prior to filtering. 21 # Distribution of the number of SNPs per catalog locus prior to filtering.
23 n_snps n_loci 22 n_snps n_loci
25 END snps_per_loc_prefilters 24 END snps_per_loc_prefilters
26 25
27 BEGIN samples_per_loc_postfilters 26 BEGIN samples_per_loc_postfilters
28 # Distribution of valid samples matched to a catalog locus after filtering. 27 # Distribution of valid samples matched to a catalog locus after filtering.
29 n_samples n_loci 28 n_samples n_loci
30 0 3 29 2 3
31 END samples_per_loc_postfilters 30 END samples_per_loc_postfilters
32 31
33 BEGIN missing_samples_per_loc_postfilters 32 BEGIN missing_samples_per_loc_postfilters
34
35 # Distribution of missing samples for each catalog locus after filtering. 33 # Distribution of missing samples for each catalog locus after filtering.
36 # Absent samples at locus Count 34 # Absent samples at locus Count
37 2 3 35 0 3
38 END missing_samples_per_loc_postfilters 36 END missing_samples_per_loc_postfilters
39 37
40 BEGIN snps_per_loc_postfilters 38 BEGIN snps_per_loc_postfilters
41 # Distribution of the number of SNPs per catalog locus (after filtering). 39 # Distribution of the number of SNPs per catalog locus (after filtering).
42 n_snps n_loci 40 n_snps n_loci