diff test-data/gstacks/gstacks.log.distribs @ 5:687f84474d33 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks2 commit f507c4eaca0fe04e730d7c3bbb9e9d2488239a9f
author matthias
date Thu, 20 Jun 2019 08:12:36 -0400
parents 924e7889aa05
children
line wrap: on
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--- a/test-data/gstacks/gstacks.log.distribs	Wed Feb 27 09:51:06 2019 -0500
+++ b/test-data/gstacks/gstacks.log.distribs	Thu Jun 20 08:12:36 2019 -0400
@@ -19,25 +19,25 @@
 Num. threads: 1
 Parallel time: 0.0
 Average thread time spent:
-     0.0  reading (2.9%)
-     0.0  processing (95.7%)
-             0.0 pre-alignments block (69.1%)
-             0.0  reformatting fw-reads (0.2%)
-             0.0  assembling (21.2%)
-             0.0  initializing alignments (4.4%)
-             0.0  aligning (41.3%)
-             0.0  merging read pairs (2.0%)
-             0.0 post-alignments block (25.2%)
+     0.0  reading (3.1%)
+     0.0  processing (95.2%)
+             0.0 pre-alignments block (72.2%)
+             0.0  reformatting fw-reads (0.1%)
+             0.0  assembling (22.2%)
+             0.0  initializing alignments (5.4%)
+             0.0  aligning (42.9%)
+             0.0  merging read pairs (1.5%)
+             0.0 post-alignments block (21.2%)
              0.0  filtering reads (0.0%)
-             0.0  counting nucleotides (4.0%)
+             0.0  counting nucleotides (3.5%)
              0.0  genotyping (1.9%)
-             0.0  haplotyping (1.2%)
+             0.0  haplotyping (1.0%)
              0.0  computing consensus (0.1%)
              0.0  building_fa (0.1%)
-             0.0  building_vcf (17.8%)
+             0.0  building_vcf (14.6%)
      0.0  writing_fa (0.1%)
-     0.0  writing_vcf (1.0%)
+     0.0  writing_vcf (1.3%)
      0.0  clocking (0.2%)
-Total time spent writing vcf: 0.0 (1.0%)
+Total time spent writing vcf: 0.0 (1.3%)
 VCFwrite block size: mean=1.0(n=3); max=1
 END clockings