Mercurial > repos > matthias > samtools_bam_to_cram
comparison samtools_flagstat/test-data/samtools_flagstat_out1.txt @ 0:951c6e9486b2 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools commit 17bfa0739bf7c72cf92de0d7013437dff2bbba7f-dirty
| author | matthias |
|---|---|
| date | Fri, 22 Feb 2019 15:47:03 -0500 |
| parents | |
| children |
comparison
equal
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| -1:000000000000 | 0:951c6e9486b2 |
|---|---|
| 1 200 + 0 in total (QC-passed reads + QC-failed reads) | |
| 2 0 + 0 secondary | |
| 3 0 + 0 supplementary | |
| 4 0 + 0 duplicates | |
| 5 25 + 0 mapped (12.50% : N/A) | |
| 6 200 + 0 paired in sequencing | |
| 7 100 + 0 read1 | |
| 8 100 + 0 read2 | |
| 9 0 + 0 properly paired (0.00% : N/A) | |
| 10 0 + 0 with itself and mate mapped | |
| 11 25 + 0 singletons (12.50% : N/A) | |
| 12 0 + 0 with mate mapped to a different chr | |
| 13 0 + 0 with mate mapped to a different chr (mapQ>=5) |