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[up]
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drwxr-xr-x |
 F3D0_S188_L001_R1_001.fastq.gz
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825014 |
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F3D0_S188_L001_R2_001.fastq.gz
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1087728 |
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F3D141_S207_L001_R1_001.fastq.gz
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600241 |
-rwxr-xr-x |
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F3D141_S207_L001_R2_001.fastq.gz
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825908 |
-rwxr-xr-x |
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assignTaxonomyAddspecies_F3D0.tab
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22727 |
-rw-r--r-- |
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assignTaxonomyAddspecies_F3D0_boot.tab
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23310 |
-rw-r--r-- |
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dada_F3D0_R1.Rdata
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141846 |
-rw-r--r-- |
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dada_F3D0_R2.Rdata
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151694 |
-rw-r--r-- |
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derepFastq_F3D0_R1.Rdata
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701598 |
-rw-r--r-- |
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derepFastq_F3D0_R2.Rdata
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1200868 |
-rw-r--r-- |
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filterAndTrim_F3D0.tab
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49 |
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filterAndTrim_F3D0_R1.fq.gz
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816273 |
-rw-r--r-- |
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filterAndTrim_F3D0_R2.fq.gz
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1076228 |
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filterAndTrim_single_F3D0_R1.fq.gz
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822784 |
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filterAndTrim_single_filters_F3D0_R1.fq.gz
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123155 |
-rw-r--r-- |
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filterAndTrim_single_trimmers_F3D0_R1.fq.gz
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117364 |
-rw-r--r-- |
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learnErrors_F3D0_R1.Rdata
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14372 |
-rw-r--r-- |
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learnErrors_F3D0_R1.pdf
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17580 |
-rw-r--r-- |
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learnErrors_F3D0_R2.Rdata
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18012 |
-rw-r--r-- |
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learnErrors_F3D0_R2.pdf
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17636 |
-rw-r--r-- |
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makeSequenceTable_F3D0.pdf
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4554 |
-rw-r--r-- |
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makeSequenceTable_F3D0.tab
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21856 |
-rw-r--r-- |
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mergePairs_F3D0.Rdata
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3938 |
-rw-r--r-- |
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mergePairs_F3D0_nondefault.Rdata
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10809 |
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qualityProfile.pdf
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57968 |
-rw-r--r-- |
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qualityProfileMultiple.pdf
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35769 |
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qualityProfileMultiple_rev.pdf
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0 |
-rw-r--r-- |
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qualityProfileSmallSample.pdf
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35769 |
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qualityProfile_rev.pdf
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0 |
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reference.fa
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220 |
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reference_species.fa
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238 |
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removeBimeraDenovo_F3D0.tab
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21856 |
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removeBimeraDenovo_F3D0_dada_uniques.tab
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28806 |
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removeBimeraDenovo_F3D0_derep_uniques.tab
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584868 |
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removeBimeraDenovo_F3D0_mergepairs.Rdata
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3938 |
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seqCounts_F3D0_dadaF.tab
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38 |
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seqCounts_F3D0_derepF.tab
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45 |
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seqCounts_F3D0_filter.tab
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74 |
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seqCounts_F3D0_merge.tab
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41 |
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seqCounts_F3D0_nochim.tab
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42 |
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seqCounts_F3D0_seqtab.tab
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42 |
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