directory /test-data/ @ 6:f9040a48d23f draft

name size permissions
[up] drwxr-xr-x
file F3D0_S188_L001_R1_001.fastq.gz 825014 -rwxr-xr-x
file F3D0_S188_L001_R2_001.fastq.gz 1087728 -rwxr-xr-x
file F3D141_S207_L001_R1_001.fastq.gz 600241 -rwxr-xr-x
file F3D141_S207_L001_R2_001.fastq.gz 825908 -rwxr-xr-x
file assignTaxonomyAddspecies_F3D0.tab 22727 -rw-r--r--
file assignTaxonomyAddspecies_F3D0_boot.tab 23310 -rw-r--r--
file dada_F3D0_R1.Rdata 141846 -rw-r--r--
file dada_F3D0_R2.Rdata 151694 -rw-r--r--
file derepFastq_F3D0_R1.Rdata 701598 -rw-r--r--
file derepFastq_F3D0_R2.Rdata 1200868 -rw-r--r--
file filterAndTrim_F3D0.tab 49 -rw-r--r--
file filterAndTrim_F3D0_R1.fq.gz 816273 -rw-r--r--
file filterAndTrim_F3D0_R2.fq.gz 1076228 -rw-r--r--
file filterAndTrim_single_F3D0_R1.fq.gz 822784 -rw-r--r--
file filterAndTrim_single_filters_F3D0_R1.fq.gz 123155 -rw-r--r--
file filterAndTrim_single_trimmers_F3D0_R1.fq.gz 117364 -rw-r--r--
file learnErrors_F3D0_R1.Rdata 14372 -rw-r--r--
file learnErrors_F3D0_R1.pdf 17580 -rw-r--r--
file learnErrors_F3D0_R2.Rdata 18012 -rw-r--r--
file learnErrors_F3D0_R2.pdf 17636 -rw-r--r--
file makeSequenceTable_F3D0.pdf 4554 -rw-r--r--
file makeSequenceTable_F3D0.tab 21856 -rw-r--r--
file mergePairs_F3D0.Rdata 3938 -rw-r--r--
file mergePairs_F3D0_nondefault.Rdata 10809 -rw-r--r--
file qualityProfile.pdf 57968 -rw-r--r--
file qualityProfileMultiple.pdf 35769 -rw-r--r--
file qualityProfileSmallSample.pdf 35769 -rw-r--r--
file reference.fa 220 -rw-r--r--
file reference_species.fa 238 -rw-r--r--
file removeBimeraDenovo_F3D0.tab 21856 -rw-r--r--
file removeBimeraDenovo_F3D0_dada_uniques.tab 28806 -rw-r--r--
file removeBimeraDenovo_F3D0_derep_uniques.tab 584868 -rw-r--r--
file removeBimeraDenovo_F3D0_mergepairs.Rdata 3938 -rw-r--r--
file seqCounts_F3D0_dadaF.tab 38 -rw-r--r--
file seqCounts_F3D0_derepF.tab 45 -rw-r--r--
file seqCounts_F3D0_filter.tab 74 -rw-r--r--
file seqCounts_F3D0_merge.tab 41 -rw-r--r--
file seqCounts_F3D0_nochim.tab 42 -rw-r--r--
file seqCounts_F3D0_seqtab.tab 42 -rw-r--r--