Mercurial > repos > matthias > dada2_learnerrors
comparison macros.xml @ 8:af8d1ccbd153 draft
planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/topic/dada2/tools/dada2 commit 977f22125c9ad5c3c5560de8946017305c5633c1
| author | matthias |
|---|---|
| date | Mon, 27 May 2019 13:21:48 -0400 |
| parents | 382900945187 |
| children | ef3ebaa70032 |
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| 7:382900945187 | 8:af8d1ccbd153 |
|---|---|
| 67 <xml name="trimmers"> | 67 <xml name="trimmers"> |
| 68 <section name="trim" title="Trimming parameters"> | 68 <section name="trim" title="Trimming parameters"> |
| 69 <param argument="truncQ" type="integer" value="2" min="0" label="Truncate reads at quality threshold" help="Truncate reads at the first instance of a quality score less than or equal to this threshold"/> | 69 <param argument="truncQ" type="integer" value="2" min="0" label="Truncate reads at quality threshold" help="Truncate reads at the first instance of a quality score less than or equal to this threshold"/> |
| 70 <param argument="trimLeft" type="integer" value="0" min="0" label="Trim start of each read" help="The number of nucleotides to remove from the start of each read."/> | 70 <param argument="trimLeft" type="integer" value="0" min="0" label="Trim start of each read" help="The number of nucleotides to remove from the start of each read."/> |
| 71 <param argument="trimRight" type="integer" value="0" min="0" label="Trim end of each read" help="The number of nucleotides to remove from the end of each read"/> | 71 <param argument="trimRight" type="integer" value="0" min="0" label="Trim end of each read" help="The number of nucleotides to remove from the end of each read"/> |
| 72 <param argument="truncLen" type="integer" value="0" min="0" label="Truncate read length" help="Truncate reads after this amount of bases. Reads shorter than this are discarded."/> | 72 <param argument="truncLen" type="integer" value="0" min="0" label="Truncate read length" help="Truncate reads after this amount of bases. Reads shorter than this are discarded. (default 0: no truncation)"/> |
| 73 </section> | 73 </section> |
| 74 </xml> | 74 </xml> |
| 75 <xml name="filters"> | 75 <xml name="filters"> |
| 76 <section name="filter" title="Filtering parameters"> | 76 <section name="filter" title="Filtering parameters"> |
| 77 <param argument="maxLen" type="integer" value="" optional="true" min="0" label="Remove long reads" help="Remove reads with length greater than this value. Default: no length threshold"/> | 77 <param argument="maxLen" type="integer" value="" optional="true" min="0" label="Remove long reads" help="Remove reads with length greater than this value. Default: no length threshold"/> |