Mercurial > repos > matt-shirley > sra_tools
diff sam_dump.xml @ 21:d850324e82cf draft
fix datatype reference, increment versions
| author | Matt Shirley <mdshw5@gmail.com> |
|---|---|
| date | Wed, 19 Jun 2013 13:31:58 -0400 |
| parents | 45031bbf6b27 |
| children | 423f3eb06428 |
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--- a/sam_dump.xml Mon Jun 17 21:41:27 2013 -0400 +++ b/sam_dump.xml Wed Jun 19 13:31:58 2013 -0400 @@ -1,9 +1,9 @@ -<tool id="sam_dump" name="Extract SAM" version="1.0.1"> +<tool id="sam_dump" name="Extract SAM" version="1.0.2"> <description> format reads from NCBI SRA.</description> <command>sam-dump $header $aligned $primary '$input' > $output</command> <version_string>sam-dump --version</version_string> <inputs> - <param format="sra" name="input" type="data" label="sra archive"/> + <param format="SRA" name="input" type="data" label="sra archive"/> <param format="text" name="header" type="select" value=""> <label>Output SAM header</label> <option value="--header">Yes</option> @@ -27,7 +27,8 @@ <requirement type="package" version="2.3.2-4">sra_toolkit</requirement> </requirements> <help> - This tool extracts SAM format reads from SRA archives using sam-dump. The sam-dump program is developed at NCBI, and is available at: http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software. -Contact Matt Shirley at mdshw5@gmail.com for support and bug reports. + This tool extracts SAM format reads from SRA archives using sam-dump. + The sam-dump program is developed at NCBI, and is available at: http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software. + Contact Matt Shirley at mdshw5@gmail.com for support and bug reports. </help> </tool>