Mercurial > repos > matt-shirley > sra_tools

diff fastq_dump.xml @ 21:d850324e82cf draft

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fix datatype reference, increment versions
author Matt Shirley <mdshw5@gmail.com>
date Wed, 19 Jun 2013 13:31:58 -0400
parents a1255154fa3f
children 423f3eb06428
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--- a/fastq_dump.xml	Mon Jun 17 21:41:27 2013 -0400
+++ b/fastq_dump.xml	Wed Jun 19 13:31:58 2013 -0400
@@ -1,9 +1,9 @@
-<tool id="fastq_dump" name="Extract fastq" version="1.0.1">
+<tool id="fastq_dump" name="Extract fastq" version="1.0.2">
   <description> format reads from NCBI SRA.</description>
   <command>fastq-dump --log-level fatal --accession '${input.name}' --stdout $split $aligned '$input' > $output </command>
   <version_string>fastq-dump --version</version_string>
   <inputs>
-    <param format="sra" name="input" type="data" label="sra archive"/>
+    <param format="SRA" name="input" type="data" label="sra archive"/>
     <param format="text" name="split" type="select" value="">
       <label>Split read pairs</label>
       <option value="">No</option>