Mercurial > repos > matt-shirley > sra_tools
comparison sam_dump.xml @ 41:e64912394751 draft
add option to take plaintext file with accession on one line
| author | Matt Shirley <mdshw5@gmail.com> |
|---|---|
| date | Mon, 05 Aug 2013 09:55:32 -0400 |
| parents | f1b83804013f |
| children | ed3866e8e3b8 |
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| 40:f1b83804013f | 41:e64912394751 |
|---|---|
| 50 </when> | 50 </when> |
| 51 <when value="accession_number"> | 51 <when value="accession_number"> |
| 52 <param format="text" name="accession" type="text" label="accession"/> | 52 <param format="text" name="accession" type="text" label="accession"/> |
| 53 </when> | 53 </when> |
| 54 <when value="text"> | 54 <when value="text"> |
| 55 <param format="txt" name="text" type="txt" label="text file"/> | 55 <param format="txt" name="text" type="data" label="text file"/> |
| 56 </when> | 56 </when> |
| 57 </conditional> | 57 </conditional> |
| 58 <param format="text" name="region" type="text" label="aligned region"/> | 58 <param format="text" name="region" type="text" label="aligned region"/> |
| 59 <param format="text" name="matepairDist" type="text" label="mate-pair distance (from-to|unknown)"/> | 59 <param format="text" name="matepairDist" type="text" label="mate-pair distance (from-to|unknown)"/> |
| 60 <param format="text" name="header" type="select" value="yes"> | 60 <param format="text" name="header" type="select" value="yes"> |