# HG changeset patch
# User Matt Shirley <mdshw5@gmail.com>
# Date 1364743931 14400
# Node ID 61f9e983ece47fc2a2ef9303482b35b98ebc9aeb
# Parent  4c66fade23918963faad4c6504619ef99b9f7923
Increment version

diff -r 4c66fade2391 -r 61f9e983ece4 fixFastq.xml
--- a/fixFastq.xml	Sun Mar 31 10:50:39 2013 -0400
+++ b/fixFastq.xml	Sun Mar 31 11:32:11 2013 -0400
@@ -2,10 +2,11 @@
   <description> generated using Hamming encoding</description>
   <command interpreter="python">fixFastq.py $strict $list $fastq $out</command>
   <inputs>
-    <param format="text" name="strict" type="select" value=""/>
+    <param format="text" name="strict" type="select" value="">
       <label>Replace unknown barcodes with N</label>
       <option value="">No</option>
       <option value="-s">Yes</option>
+    </param>
     <param format="tabular" name="list" type="data" label="List of barcodes used"/>
     <param format="fastqsanger" name="fastq" type="data" label="Barcoded reads"/>
   </inputs>
@@ -16,7 +17,7 @@
     <exit_code range="127" level="fatal" description="Cannot find fixFastq.py"/>
   </stdio>
   <requirements>
-    <requirement type="package" version="1.0">hamstring</requirement>
+    <requirement type="package" version="1.01">hamstring</requirement>
   </requirements>
   <help>
     This program accepts a fastqsanger file containing reads that are barcoded on the 5' end using a Hamming7,4 DNA barcode. A list of valid barcodes is checked, 
diff -r 4c66fade2391 -r 61f9e983ece4 tool_dependencies.xml
--- a/tool_dependencies.xml	Sun Mar 31 10:50:39 2013 -0400
+++ b/tool_dependencies.xml	Sun Mar 31 11:32:11 2013 -0400
@@ -1,7 +1,7 @@
 <?xml version="1.0"?>
 <tool_dependency>
-  <package name="hamstring" version="1.0">
-    <install version="1.0">
+  <package name="hamstring" version="1.01">
+    <install version="1.01">
       <actions>
 	<action type="shell_command">git clone git://github.com/mdshw5/hamstring.git</action>
 	<action type="shell_command">mv fixFastq.py $INSTALL_DIR</action>