# HG changeset patch
# User marcoalbuquerque
# Date 1425346321 18000
# Node ID b90e70fb1ac51abc0e95ee18222705d2f3aad983
# Parent  06f281bbdf5bdfd382007ba919518b67b1fec70d
Uploaded

diff -r 06f281bbdf5b -r b90e70fb1ac5 bam_parallelism_test.xml
--- a/bam_parallelism_test.xml	Mon Mar 02 20:30:00 2015 -0500
+++ b/bam_parallelism_test.xml	Mon Mar 02 20:32:01 2015 -0500
@@ -8,7 +8,13 @@
 		ln -s $normal input.bam;
 		ln -s $normal.metadata.bam_index input.bam.bai;
 
-		samtools view input.bam \$(cat $infile) | head -n 5 > $outfile;
+		touch $outfile;
+
+		cat $infile;
+
+		echo \$(cat $infile);
+
+		samtools view input.bam \$(cat $infile) | head -n 5 >> $outfile;
 
 	</command>
 	<inputs>