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Migrated tool version 0.93 from old tool shed archive to new tool shed repository
author marcel
date Tue, 07 Jun 2011 15:59:36 -0400
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e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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1 Version 0.93, 05-30-2011 :
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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2 - Split Rescorer into 3 tools: SimpleRescorer, TaGRes-train, TaGRes (Target-Specific Grid-Rescoring)
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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3 - Allow to optionally specify output filenames to LigandFileSplitter
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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4 - Fixed creation of galaxy-scripts for tools with inputfile-lists
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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5 - Fixed creation of galaxy-scripts for Converter and DockResultMerger
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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6 - Automatically create and add all files necessary for integration of CADDSuite into Galaxy to the makeself archive
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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7 - New tool MolFilter
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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8 - Fixed some gnuplot issues
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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9 - Added PDBDownload tool
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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10 - Slight change of format of ParamFile
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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11 - Added some missing tool-manuals
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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12 - Disable B-factor check for hydrogens in ProteinCheck
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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13 - Added safeguards to several tools
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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14 - Automatically delete existing hydrogens from BALL-system before protonation is done by ProteinProtonator
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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15 - Fixed reading of mulitple ScoreGridSets (for cases when no ini-file is used)
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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16 - Simplified use of VendorFinder by allowing to set all db-parameters on the command-line (instead of using ini-file)
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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17 - Enhanced several tool manuals
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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18 - Let tools register their category (e.g. Preparation, Docking, etc.). Write and read information about this category to/from ParamFiles.
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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19
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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20 Version 0.92, 05-17-2011 :
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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21 - Speed-up of ob-mol generation
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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22 - Support build on Windows
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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23 - ProteinCheck now generates protein-quality report as pdf
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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24 - Added info about mandatory parameters and parameter-restrictions to parameter xml-file
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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25 - Simplified use of DBImporter+DBExporter by allowing to set all db-parameters on the command-line (instead of using ini-file)
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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26 - Simplified use of some other tools by merging several flags into one string-parameter that has restrictions.
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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27 - New tool MolDepict. It generates structure diagrams for small molecules by using openbabel's svg-writer and merges them to one pdf-file (3 on 5).
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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28 - Allow to create makeself-archive containing CADDSuite, all necessary contrib-libs, data-files and install-script
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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29 - Write information about supported file-formats to parameter xml-file
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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30 - new tool ProteinProtonator
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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31 - new tool Ligand3DGenerator
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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32 - new tool GalaxyConfigGenerator
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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33 - allow to open file that do not have an extension (by searching for format-specific keywords)
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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34
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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35 Version 0.91, 04-12-2011:
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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36 - All tools now write a manual text to cout as well as to parameter xml-file (as generated by 'write_par)
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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37
e590e0f70b60 Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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38 Version 0.9