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file Alignment.pm 1722 -rw-r--r--
file AnnotateRegulatoryFeatures.pm 76803 -rw-r--r--
file Annotation.pm 4374 -rw-r--r--
file ClusterMotifs.pm 6970 -rw-r--r--
file ConvergeReplicates.pm 3546 -rw-r--r--
file Funcgen.pm 12375 -rw-r--r--
file Import.pm 6485 -rw-r--r--
file ImportMotifFeatures.pm 7404 -rw-r--r--
file InferMotifs.pm 4540 -rw-r--r--
file MakeDnaseProfile.pm 4522 -rw-r--r--
file Motif.pm 4427 -rw-r--r--
file RunBWA.pm 3468 -rw-r--r--
file RunCCAT.pm 8425 -rw-r--r--
file RunCentipede.pm 1816 -rw-r--r--
file RunSWEmbl.pm 9915 -rw-r--r--
file SWEmbl.pm 7937 -rw-r--r--
file SetupAlignmentPipeline.pm 4210 -rw-r--r--
file SetupAnnotationPipeline.pm 1869 -rw-r--r--
file SetupMotifInference.pm 1956 -rw-r--r--
file SetupPeaksPipeline.pm 5393 -rw-r--r--
file WrapUpAlignment.pm 4387 -rw-r--r--