Mercurial > repos > mahtabm > ensembl
view variant_effect_predictor/Bio/EnsEMBL/DBSQL/GOTermAdaptor.pm @ 0:1f6dce3d34e0
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author | mahtabm |
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date | Thu, 11 Apr 2013 02:01:53 -0400 |
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=head1 LICENSE Copyright (c) 1999-2012 The European Bioinformatics Institute and Genome Research Limited. All rights reserved. This software is distributed under a modified Apache license. For license details, please see http://www.ensembl.org/info/about/code_licence.html =head1 CONTACT Please email comments or questions to the public Ensembl developers list at <dev@ensembl.org>. Questions may also be sent to the Ensembl help desk at <helpdesk@ensembl.org>. =cut =head1 NAME Bio::EnsEMBL::DBSQL::GOTermAdaptor =head1 DESCRIPTION A specialization of Bio::EnsEMBL::DBSQL::OntologyTermAdaptor, specifically for Gene Ontology (GO) terms. See the documentation of Bio::EnsEMBL::DBSQL::OntologyTermAdaptor for further information. =head1 METHODS =cut package Bio::EnsEMBL::DBSQL::GOTermAdaptor; use strict; use warnings; use base qw( Bio::EnsEMBL::DBSQL::OntologyTermAdaptor ); =head2 new Arg [1] : Bio::EnsEMBL::DBSQL::DBAdaptor Argument required for parent class Bio::EnsEMBL::DBSQL::BaseAdaptor. Description : Creates an ontology term adaptor for GO terms. Example : my $go_adaptor = Bio::EnsEMBL::DBSQL::GOTermAdaptor->new( $dba ); Return type : Bio::EnsEMBL::DBSQL::GOTermAdaptor =cut sub new { my ( $proto, $dba ) = @_; my $this = $proto->SUPER::new( $dba, 'GO' ); return $this; } 1;