diff variant_effect_predictor/Bio/Graphics/Glyph/extending_arrow.pm @ 0:1f6dce3d34e0

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/variant_effect_predictor/Bio/Graphics/Glyph/extending_arrow.pm	Thu Apr 11 02:01:53 2013 -0400
@@ -0,0 +1,77 @@
+package Bio::Graphics::Glyph::extending_arrow;
+
+use strict;
+use vars '@ISA';
+use Bio::Graphics::Glyph::anchored_arrow;
+@ISA = 'Bio::Graphics::Glyph::anchored_arrow';
+
+=head1 NAME
+
+Bio::Graphics::Glyph::extending_arrow -- The "extending arrow" glyph
+
+=head1 SYNOPSIS
+
+This is deprecated.  Use L<Bio::Graphics::Glyph::anchored_arrow>
+instead.
+
+=head1 DESCRIPTION
+
+This glyph was designed to show a segment that goes beyond the panel.
+If the segment is contained within the panel, a vertical base is
+shown.  Otherwise, an arrow is shown.
+
+Also see the arrow glyph.
+
+=head2 OPTIONS
+
+See L<Bio::Graphics::Glyph::anchored_arrow>.  This glyph has been
+deprecated.
+
+=head1 BUGS
+
+Please report them.
+
+=head1 SEE ALSO
+
+L<Bio::Graphics::Panel>,
+L<Bio::Graphics::Glyph>,
+L<Bio::Graphics::Glyph::arrow>,
+L<Bio::Graphics::Glyph::cds>,
+L<Bio::Graphics::Glyph::crossbox>,
+L<Bio::Graphics::Glyph::diamond>,
+L<Bio::Graphics::Glyph::dna>,
+L<Bio::Graphics::Glyph::dot>,
+L<Bio::Graphics::Glyph::ellipse>,
+L<Bio::Graphics::Glyph::extending_arrow>,
+L<Bio::Graphics::Glyph::generic>,
+L<Bio::Graphics::Glyph::graded_segments>,
+L<Bio::Graphics::Glyph::heterogeneous_segments>,
+L<Bio::Graphics::Glyph::line>,
+L<Bio::Graphics::Glyph::pinsertion>,
+L<Bio::Graphics::Glyph::primers>,
+L<Bio::Graphics::Glyph::rndrect>,
+L<Bio::Graphics::Glyph::segments>,
+L<Bio::Graphics::Glyph::ruler_arrow>,
+L<Bio::Graphics::Glyph::toomany>,
+L<Bio::Graphics::Glyph::transcript>,
+L<Bio::Graphics::Glyph::transcript2>,
+L<Bio::Graphics::Glyph::translation>,
+L<Bio::Graphics::Glyph::triangle>,
+L<Bio::DB::GFF>,
+L<Bio::SeqI>,
+L<Bio::SeqFeatureI>,
+L<Bio::Das>,
+L<GD>
+
+=head1 AUTHOR
+
+Originally by Shengqiang Shu.  Temporarily deprecated by Lincoln
+Stein.
+
+Copyright (c) 2001 Berkeley Drosophila Genome Project
+
+This library is free software; you can redistribute it and/or modify
+it under the same terms as Perl itself.  See DISCLAIMER.txt for
+disclaimers of warranty.
+
+=cut