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comparison variant_effect_predictor/Bio/Variation/README @ 0:1f6dce3d34e0
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| author | mahtabm |
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| date | Thu, 11 Apr 2013 02:01:53 -0400 |
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| -1:000000000000 | 0:1f6dce3d34e0 |
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| 2 README for Bio::Variation classes | |
| 3 | |
| 4 | |
| 5 These classes are part of "Computational Mutation Expression Toolkit" | |
| 6 project at European Bioinformatics Institute | |
| 7 <http://www.ebi.ac.uk/mutations/toolkit/>, but they are written to be | |
| 8 as general as possinble. | |
| 9 | |
| 10 Bio::Variation name space contains modules to store sequence variation | |
| 11 information as differences between the reference sequence and changes | |
| 12 sequences. Also included are classes to write out and recrete objects | |
| 13 from EMBL-like flat files and XML. Lastly, there are simple classes to | |
| 14 calculate values for sequence change objects. | |
| 15 | |
| 16 See "Computational Mutation Expression Toolkit" web pages for more | |
| 17 information: | |
| 18 | |
| 19 http://www.ebi.ac.uk/mutations/toolkit/ | |
| 20 | |
| 21 | |
| 22 Send bug reports using the bioperl bug-tracking system at | |
| 23 http://bio.perl.org/Bugs/ or send them via e-mail to | |
| 24 bioperl-bugs@bio.perl.org. | |
| 25 | |
| 26 Send general comments, questions, and feature requests to the bioperl | |
| 27 mailing list: | |
| 28 | |
| 29 bioperl-l@bioperl.org | |
| 30 | |
| 31 Heikki Lehväslaiho <heikki@ebi.ac.uk> |
