Mercurial > repos > mahtabm > ensembl
comparison variant_effect_predictor/Bio/Graphics/Glyph/span.pm @ 0:1f6dce3d34e0
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| author | mahtabm |
|---|---|
| date | Thu, 11 Apr 2013 02:01:53 -0400 |
| parents | |
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| -1:000000000000 | 0:1f6dce3d34e0 |
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| 1 package Bio::Graphics::Glyph::span; | |
| 2 | |
| 3 use strict; | |
| 4 use vars '@ISA'; | |
| 5 @ISA = 'Bio::Graphics::Glyph::anchored_arrow'; | |
| 6 use Bio::Graphics::Glyph::anchored_arrow; | |
| 7 | |
| 8 sub no_trunc { 0 } | |
| 9 | |
| 10 sub arrowheads {0,0,1,1} | |
| 11 | |
| 12 1; | |
| 13 | |
| 14 __END__ | |
| 15 | |
| 16 =head1 NAME | |
| 17 | |
| 18 Bio::Graphics::Glyph::span - The "span" glyph | |
| 19 | |
| 20 =head1 SYNOPSIS | |
| 21 | |
| 22 See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>. | |
| 23 | |
| 24 =head1 DESCRIPTION | |
| 25 | |
| 26 This glyph draws a span that looks like this: | |
| 27 | |
| 28 |-----------------------------| | |
| 29 | |
| 30 If one or both ends go off the edges of the panel, they are truncated: | |
| 31 | |
| 32 ----------------------| left end off picture | |
| 33 |---------------------------- right end off picture | |
| 34 ------------------------------------- both ends off picture | |
| 35 | |
| 36 =head1 OPTIONS | |
| 37 | |
| 38 The standard options are recognized. | |
| 39 | |
| 40 =head1 BUGS | |
| 41 | |
| 42 Please report them. | |
| 43 | |
| 44 =head1 SEE ALSO | |
| 45 | |
| 46 | |
| 47 L<Bio::Graphics::Panel>, | |
| 48 L<Bio::Graphics::Glyph>, | |
| 49 L<Bio::Graphics::Glyph::anchored_arrow>, | |
| 50 L<Bio::Graphics::Glyph::arrow>, | |
| 51 L<Bio::Graphics::Glyph::cds>, | |
| 52 L<Bio::Graphics::Glyph::crossbox>, | |
| 53 L<Bio::Graphics::Glyph::diamond>, | |
| 54 L<Bio::Graphics::Glyph::dna>, | |
| 55 L<Bio::Graphics::Glyph::dot>, | |
| 56 L<Bio::Graphics::Glyph::ellipse>, | |
| 57 L<Bio::Graphics::Glyph::extending_arrow>, | |
| 58 L<Bio::Graphics::Glyph::generic>, | |
| 59 L<Bio::Graphics::Glyph::graded_segments>, | |
| 60 L<Bio::Graphics::Glyph::heterogeneous_segments>, | |
| 61 L<Bio::Graphics::Glyph::line>, | |
| 62 L<Bio::Graphics::Glyph::pinsertion>, | |
| 63 L<Bio::Graphics::Glyph::primers>, | |
| 64 L<Bio::Graphics::Glyph::rndrect>, | |
| 65 L<Bio::Graphics::Glyph::segments>, | |
| 66 L<Bio::Graphics::Glyph::ruler_arrow>, | |
| 67 L<Bio::Graphics::Glyph::toomany>, | |
| 68 L<Bio::Graphics::Glyph::transcript>, | |
| 69 L<Bio::Graphics::Glyph::transcript2>, | |
| 70 L<Bio::Graphics::Glyph::translation>, | |
| 71 L<Bio::Graphics::Glyph::triangle>, | |
| 72 L<Bio::DB::GFF>, | |
| 73 L<Bio::SeqI>, | |
| 74 L<Bio::SeqFeatureI>, | |
| 75 L<Bio::Das>, | |
| 76 L<GD> | |
| 77 | |
| 78 =head1 AUTHOR | |
| 79 | |
| 80 Allen Day E<lt>day@cshl.orgE<gt>. | |
| 81 | |
| 82 Copyright (c) 2001 Cold Spring Harbor Laboratory | |
| 83 | |
| 84 This library is free software; you can redistribute it and/or modify | |
| 85 it under the same terms as Perl itself. See DISCLAIMER.txt for | |
| 86 disclaimers of warranty. | |
| 87 | |
| 88 =cut |
