Mercurial > repos > mahtabm > ensembl
comparison variant_effect_predictor/Bio/Biblio/Journal.pm @ 0:1f6dce3d34e0
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author | mahtabm |
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date | Thu, 11 Apr 2013 02:01:53 -0400 |
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1 # $Id: Journal.pm,v 1.6 2002/10/22 07:45:11 lapp Exp $ | |
2 # | |
3 # BioPerl module for Bio::Biblio::Journal | |
4 # | |
5 # Cared for by Martin Senger <senger@ebi.ac.uk> | |
6 # For copyright and disclaimer see below. | |
7 | |
8 # POD documentation - main docs before the code | |
9 | |
10 =head1 NAME | |
11 | |
12 Bio::Biblio::Journal - Representation of a journal | |
13 | |
14 =head1 SYNOPSIS | |
15 | |
16 $obj = new Bio::Biblio::Journal (-name => 'The Perl Journal', | |
17 -issn => '1087-903X'); | |
18 --- OR --- | |
19 | |
20 $obj = new Bio::Biblio::Journal; | |
21 $obj->issn ('1087-903X'); | |
22 | |
23 =head1 DESCRIPTION | |
24 | |
25 A storage object for a journal. | |
26 See its place in the class hierarchy in | |
27 http://industry.ebi.ac.uk/openBQS/images/bibobjects_perl.gif | |
28 | |
29 =head2 Attributes | |
30 | |
31 The following attributes are specific to this class | |
32 (however, you can also set and get all attributes defined in the parent classes): | |
33 | |
34 abbreviation | |
35 issn | |
36 name | |
37 provider type: Bio::Biblio::Provider | |
38 | |
39 =head1 SEE ALSO | |
40 | |
41 =over | |
42 | |
43 =item * | |
44 | |
45 OpenBQS home page: http://industry.ebi.ac.uk/openBQS | |
46 | |
47 =item * | |
48 | |
49 Comments to the Perl client: http://industry.ebi.ac.uk/openBQS/Client_perl.html | |
50 | |
51 =back | |
52 | |
53 =head1 FEEDBACK | |
54 | |
55 =head2 Mailing Lists | |
56 | |
57 User feedback is an integral part of the evolution of this and other | |
58 Bioperl modules. Send your comments and suggestions preferably to | |
59 the Bioperl mailing list. Your participation is much appreciated. | |
60 | |
61 bioperl-l@bioperl.org - General discussion | |
62 http://bioperl.org/MailList.shtml - About the mailing lists | |
63 | |
64 =head2 Reporting Bugs | |
65 | |
66 Report bugs to the Bioperl bug tracking system to help us keep track | |
67 of the bugs and their resolution. Bug reports can be submitted via | |
68 email or the web: | |
69 | |
70 bioperl-bugs@bioperl.org | |
71 http://bugzilla.bioperl.org/ | |
72 | |
73 =head1 AUTHORS | |
74 | |
75 Heikki Lehvaslaiho (heikki@ebi.ac.uk), | |
76 Martin Senger (senger@ebi.ac.uk) | |
77 | |
78 =head1 COPYRIGHT | |
79 | |
80 Copyright (c) 2002 European Bioinformatics Institute. All Rights Reserved. | |
81 | |
82 This module is free software; you can redistribute it and/or modify | |
83 it under the same terms as Perl itself. | |
84 | |
85 =head1 DISCLAIMER | |
86 | |
87 This software is provided "as is" without warranty of any kind. | |
88 | |
89 =cut | |
90 | |
91 | |
92 # Let the code begin... | |
93 | |
94 package Bio::Biblio::Journal; | |
95 use strict; | |
96 use vars qw(@ISA); | |
97 | |
98 use Bio::Biblio::BiblioBase; | |
99 | |
100 @ISA = qw(Bio::Biblio::BiblioBase); | |
101 | |
102 # | |
103 # a closure with a list of allowed attribute names (these names | |
104 # correspond with the allowed 'get' and 'set' methods); each name also | |
105 # keep what type the attribute should be (use 'undef' if it is a | |
106 # simple scalar) | |
107 # | |
108 { | |
109 my %_allowed = | |
110 ( | |
111 _abbreviation => undef, | |
112 _issn => undef, | |
113 _name => undef, | |
114 _provider => 'Bio::Biblio::Provider', | |
115 ); | |
116 | |
117 # return 1 if $attr is allowed to be set/get in this class | |
118 sub _accessible { | |
119 my ($self, $attr) = @_; | |
120 exists $_allowed{$attr}; | |
121 } | |
122 | |
123 # return an expected type of given $attr | |
124 sub _attr_type { | |
125 my ($self, $attr) = @_; | |
126 $_allowed{$attr}; | |
127 } | |
128 } | |
129 | |
130 1; | |
131 __END__ |