annotate variant_effect_predictor/Bio/Factory/ObjectFactoryI.pm @ 3:d30fa12e4cc5 default tip

Merge heads 2:a5976b2dce6f and 1:09613ce8151e which were created as a result of a recently fixed bug.
author devteam <devteam@galaxyproject.org>
date Mon, 13 Jan 2014 10:38:30 -0500
parents 1f6dce3d34e0
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1 # $Id: ObjectFactoryI.pm,v 1.3 2002/10/22 07:45:14 lapp Exp $
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2 #
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3 # BioPerl module for Bio::Factory::ObjectFactoryI
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4 #
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5 # Cared for by Jason Stajich <jason@bioperl.org>
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6 #
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7 # Copyright Jason Stajich
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8 #
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9 # You may distribute this module under the same terms as perl itself
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10
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11 # POD documentation - main docs before the code
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12
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13 =head1 NAME
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14
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15 Bio::Factory::ObjectFactoryI - A General object creator factory
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16
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17 =head1 SYNOPSIS
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18
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19 # see the implementations of this interface for details but
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20 # basically
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21
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22 my $obj = $factory->create(%args);
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23
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24 =head1 DESCRIPTION
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25
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26 This interface is the basic structure for a factory which creates new
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27 objects. In this case it is up to the implementer to check arguments
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28 and initialize whatever new object the implementing class is designed for.
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29
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30 =head1 FEEDBACK
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31
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32 =head2 Mailing Lists
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33
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34 User feedback is an integral part of the evolution of this and other
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35 Bioperl modules. Send your comments and suggestions preferably to
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36 the Bioperl mailing list. Your participation is much appreciated.
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37
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38 bioperl-l@bioperl.org - General discussion
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39 http://bioperl.org/MailList.shtml - About the mailing lists
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40
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41 =head2 Reporting Bugs
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42
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43 Report bugs to the Bioperl bug tracking system to help us keep track
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44 of the bugs and their resolution. Bug reports can be submitted via
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45 email or the web:
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46
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47 bioperl-bugs@bioperl.org
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48 http://bugzilla.bioperl.org/
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49
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50 =head1 AUTHOR - Jason Stajich
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51
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52 Email jason@bioperl.org
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53
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54 Describe contact details here
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55
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56 =head1 CONTRIBUTORS
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57
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58 Additional contributors names and emails here
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59
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60 =head1 APPENDIX
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61
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62 The rest of the documentation details each of the object methods.
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63 Internal methods are usually preceded with a _
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64
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65 =cut
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66
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67
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68 # Let the code begin...
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69
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70
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71 package Bio::Factory::ObjectFactoryI;
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72 use vars qw(@ISA);
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73 use strict;
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74 use Carp;
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75 use Bio::Root::RootI;
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76
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77 @ISA = qw( Bio::Root::RootI );
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78
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79 =head2 create
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80
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81 Title : create
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82 Usage : $factory->create(%args)
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83 Function: Create a new object
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84 Returns : a new object
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85 Args : hash of initialization parameters
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86
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87
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88 =cut
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89
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90 sub create{
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91 my ($self,@args) = @_;
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92 $self->throw_not_implemented();
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93 }
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94
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95 =head2 create_object
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96
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97 Title : create_object
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98 Usage : $obj = $factory->create_object(%args)
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99 Function: Create a new object.
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100
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101 This is supposed to supercede create(). Right now it only delegates
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102 to create().
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103 Returns : a new object
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104 Args : hash of initialization parameters
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105
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106
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107 =cut
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108
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109 sub create_object{
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110 my ($self,@args) = @_;
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111 return $self->create(@args);
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112 }
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113
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114 1;