annotate variant_effect_predictor/Bio/EnsEMBL/Utils/Proxy.pm @ 3:d30fa12e4cc5 default tip

Merge heads 2:a5976b2dce6f and 1:09613ce8151e which were created as a result of a recently fixed bug.
author devteam <devteam@galaxyproject.org>
date Mon, 13 Jan 2014 10:38:30 -0500
parents 1f6dce3d34e0
children
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0
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1 =head1 LICENSE
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2
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3 Copyright (c) 1999-2012 The European Bioinformatics Institute and
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4 Genome Research Limited. All rights reserved.
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5
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6 This software is distributed under a modified Apache license.
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7 For license details, please see
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8
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9 http://www.ensembl.org/info/about/code_licence.html
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10
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11 =head1 CONTACT
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12
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13 Please email comments or questions to the public Ensembl
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14 developers list at <dev@ensembl.org>.
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15
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16 Questions may also be sent to the Ensembl help desk at
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17 <helpdesk@ensembl.org>.
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18
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19 =cut
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20
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21 =head1 NAME
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22
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23 Bio::EnsEMBL::Utils::Proxy
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24
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25 =head1 SYNOPSIS
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26
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27 #Simple arounds logging proxy
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28 package myproxy;
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29 use base qw/Bio::EnsEMBL::Utils::Proxy/;
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30 sub __resolver {
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31 my ($invoker, $package, $method) = @_;
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32 return sub {
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33 my ($self, @args);
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34 warn "Entering into ${package}::${method}";
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35 my @capture = $self->$method(@args);
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36 warn "Exiting from ${package}::${method}";
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37 return @capture;
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38 };
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39 }
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40
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41 1;
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42
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43 =head1 DESCRIPTION
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44
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45 This class offers Proxy objects similar to those found in Java's
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46 C<java.lang.reflect.Proxy> object. This class should be overriden and
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47 then implement C<__resolver()>. The C<__resolver()> method returns a
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48 subroutine to the intended action which the proxy object installs into
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49 the calling class' scope.
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50
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51 All methods internal to the proxy are prefixed with a double underscore
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52 to avoid corruption/intrusion into the normal public and private scope of
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53 most classes.
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54
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55 =head1 METHODS
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56
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57 =cut
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58
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59 package Bio::EnsEMBL::Utils::Proxy;
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60
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61 use Bio::EnsEMBL::Utils::Exception qw/throw/;
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62
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63 use vars '$AUTOLOAD';
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64
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65 =head2 new
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66
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67 Arg [1] : The object to proxy
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68 Example : my $newobj = Bio::EnsEMBL::Utils::Proxy->new($myobj);
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69 Description : Provides a new instance of a proxy
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70 Returntype : Bio::EnsEMBL::Utils::Proxy the new instance
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71 Exceptions : None
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72 Caller : public
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73 Status : -
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74
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75 =cut
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76
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77 sub new {
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78 my ($class, $proxy) = @_;
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79 my $self = bless({}, ref($class)||$class);
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80 $self->{__proxy} = $proxy;
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81 return $self;
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82 }
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83
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84 =head2 __proxy
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85
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86 Example : -
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87 Description : The proxy accessor
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88 Returntype : Any the proxied object
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89 Exceptions : None
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90 Caller : -
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91 Status : -
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92
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93 =cut
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94
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95 sub __proxy {
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96 my ($self) = @_;
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97 return $_[0]->{__proxy};
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98 }
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99
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100 =head2 isa
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101
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102 Args : Object type to test
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103 Example : $obj->isa('Bio::EnsEMBL::Utils::Proxy');
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104 Description : Overriden to provide C<isa()> support for proxies. Will return
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105 true if this object is assignable to the given type or the
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106 proxied object is
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107 Returntype : Boolean; performs same as a normal can
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108 Exceptions : None
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109 Caller : caller
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110 Status : status
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111
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112 =cut
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113
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114
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115 sub isa {
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116 my ($self, $class) = @_;
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117 return 1 if $self->SUPER::isa($class);
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118 return 1 if $self->__proxy()->isa($class);
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119 return 0;
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120 }
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121
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122 =head2 can
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123
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124 Args : Method name to test
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125 Example : $obj->can('__proxy');
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126 Description : Overriden to provide C<can()> support for proxies. Will return
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127 true if this object implements the given method or the
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128 proxied object can
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129 Returntype : Code; performs same as a normal can
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130 Exceptions : None
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131 Caller : caller
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132 Status : status
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133
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134 =cut
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135
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136 sub can {
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137 my ($self, $method) = @_;
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138 return 1 if $self->SUPER::can($method);
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139 return 1 if $self->__proxy()->can($method);
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140 return 0;
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141 }
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142
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143 =head2 DESTROY
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144
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145 Example : -
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146 Description : Provided because of AutoLoad
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147 Returntype : None
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148 Exceptions : None
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149 Caller : -
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150 Status : -
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151
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152 =cut
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153
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154
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155
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156 sub DESTROY {
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157 # left blank
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158 }
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159
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160 =head2 AUTOLOAD
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161
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162 Example : -
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163 Description : Performs calls to C<__resolver()> and installs the subroutine
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164 into the current package scope.
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165 Returntype : None
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166 Exceptions : Thrown if C<__resolver()> could not return a subroutine
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167 Caller : -
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168 Status : -
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169
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170 =cut
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171
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172 sub AUTOLOAD {
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173 my ($self, @args) = @_;
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174 my ($package_name, $method_name) = $AUTOLOAD =~ m/ (.*) :: (.*) /xms;
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175 my $sub = $self->__resolver($package_name, $method_name, @args);
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176 if(! $sub) {
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177 my $type = ref $self ? 'object' : 'class';
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178 throw qq{Can't locate $type method "$method_name" via package "$package_name". No subroutine was generated};
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179 }
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180 *$AUTOLOAD = $sub;
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181 goto &$sub;
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182 }
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183
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184 sub __resolver {
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185 my ($self, $package_name, $method, @args) = @_;
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186 #override to provide the subroutine to install
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187 throw "Unimplemented __resolver() in $package_name. Please implement";
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188 }
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189
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190 1;
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191
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192 __END__